Trichinella spiralis: Tsp_12572
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Entry
Tsp_12572 CDS
T01609
Name
(RefSeq) putative calponin
KO
K17336
plastin-3
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsp03400
]
Tsp_12572
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tsp04812
]
Tsp_12572
04147 Exosome [BR:
tsp04147
]
Tsp_12572
DNA repair and recombination proteins [BR:
tsp03400
]
Eukaryotic type
Check point factors
Other check point factors
Tsp_12572
Cytoskeleton proteins [BR:
tsp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
Tsp_12572
Exosome [BR:
tsp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Tsp_12572
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CH
EF-hand_7
EF-hand_5
EF-hand_6
EF-hand_1
CAMSAP_CH
EF-hand_8
RasGEF
DUF4423
Motif
Other DBs
NCBI-GeneID:
10899304
NCBI-ProteinID:
XP_003366336
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MPCCVNHPTDFRLLLTHIDINGDGAIQLSELQRAFEAVGLKLPSYQVRDLIREHFPNYST
DASLSVIEFAQLFAKLKEAADPKFKKRIQKAENVHVLGGLSEASQEQGIYHSVRIEEQKF
VIRSRSYTFASVDQIRRRFVSENGGRKLINLAVPETIDERAINRKNLNTYTKRENLTLAV
NSARAIGCNIVNIDADDLAKGKPHLVLGLFSQIDLVHVPGLFRLLDEGENLNDLQRLSPE
QILMRWVNYHLQQAGVSRKLNNFTTDVQDSFIYTHLLKQIAPPDRNVTLDPLRIQNSDLE
RAESMLREADKLDCRAFVTAQDVINGVYKLNLAFVANLFNTWPGLKPPGEEELDNIEEIL
EETREERTYRNWMNSVGVSPTVNWLYSDLCSGLIIFQLYDVIEPGLVDWKRVVKKFTKMD
RMMNQIQNCNYAVDLGKRLRFSLVGIQGKDIYDGNRTLSLALIWQLMRAYTLTILANCTQ
SGSLATDKEILDWVNNRLKESGKTLSISGFQDSKISDAKVVIDLIDAIQPGVIQYDLIKS
GVTFEEKMDNAKYAISTARKIGAKIYALPEDIVECKPKMVMTVFACLMARDYVPNMRKAV
SEKDL
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgccctgttgtgtgaatcatcctactgacttccgcttactgctgactcacattgatatc
aacggtgatggtgcgatccagctttcagaattgcagcgtgccttcgaagctgttggtttg
aaacttccatcatatcaagtgcgagatcttatcagagaacattttccaaattacagtacc
gatgcatccttgtcagtgatcgaatttgcccagctttttgcgaaacttaaagaagcagcg
gatccaaaattcaaaaagcgtattcaaaaagcggaaaatgtgcacgtgcttggaggactt
tctgaagctagtcaagagcaaggaatatatcatagtgtgcgaatcgaggagcaaaaattt
gtcatccgatcgagatcttatacatttgcttccgttgaccaaatccggagacgatttgta
tcagaaaatggtggacgcaagttgattaatttggcagttccagaaactattgatgagcgt
gcgattaacagaaaaaatttaaatacatatacgaaacgagaaaatctcacattggctgtt
aattctgctcgtgcaattggttgcaatatcgtcaacatcgacgcagatgatttagccaaa
ggcaaacctcatttggttcttgggttgttcagtcagattgatttggttcatgtgccagga
ctgtttcgactgcttgatgaaggggagaatttgaacgatctgcagcgtctttcaccggaa
cagattttgatgcgttgggtgaattatcatcttcagcaagctggtgtttctagaaagttg
aacaattttacgacagatgttcaagactcttttatatacacgcatctgctgaagcagatt
gcaccgcctgatagaaatgtcactttagatcctctgagaattcaaaatagtgatttggaa
cgtgctgaatctatgcttcgagaagctgacaagctggattgtcgagctttcgttactgcc
caagatgtcatcaatggagtttacaagttgaatttggcatttgttgctaatttgttcaat
acatggcctggtctgaaacctccaggcgaagaagaacttgataatattgaagaaattttg
gaagaaactcgtgaagaaagaacttatcgaaattggatgaattctgttggcgtttcacca
actgtgaactggctttattctgatttatgtagtggtttaattatttttcaactttatgat
gtcatcgagccggggcttgtcgattggaagcgtgtggttaaaaagtttacaaaaatggat
agaatgatgaatcaaatacagaactgcaattatgctgttgacctgggaaagcgattacgt
ttctctttggtgggaattcaaggcaaagatatttacgatggaaacaggactttatctctt
gctctgatttggcaattaatgcgagcttatacgttgacaatattggcaaactgcactcag
tctggttcactagcaacggacaaggaaattttggattgggtcaataatcgtttgaaagaa
agtggaaaaacgttgtccatttctggttttcaagattccaaaattagtgacgcaaaagtg
gtcattgatttaatagatgctatccaaccaggtgtcattcagtacgacttgattaaatcc
ggtgttacttttgaagaaaaaatggacaacgcgaaatatgccatttctacagcaagaaaa
ataggcgccaaaatatatgccctccctgaagatatagttgagtgtaaacctaaaatggtt
atgacagtgtttgcatgtctaatggcacgtgactatgtgccgaacatgcggaaagctgtt
tcagaaaaagatctctga
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