Thamnophis sirtalis (common garter snake): 106540110
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Entry
106540110 CDS
T06107
Symbol
PSMC1
Name
(RefSeq) 26S protease regulatory subunit 4
KO
K03062
26S proteasome regulatory subunit T2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
106540110 (PSMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tsr03051
]
106540110 (PSMC1)
Proteasome [BR:
tsr03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
106540110 (PSMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_22
nSTAND3
DUF815
AAA_5
RuvB_N
AAA_16
AAA_25
AAA_28
AAA_14
AAA_3
RNA_helicase
ATPase
IstB_IS21
TIP49
AAA_11
AAA_18
Mg_chelatase
Prot_ATP_ID_OB_N
AAA_33
AAA_7
Parvo_NS1
NB-ARC
PhoH
NACHT
AAA_24
AAA_30
TsaE
Motif
Other DBs
NCBI-GeneID:
106540110
NCBI-ProteinID:
XP_013910598
UniProt:
A0A6I9XI19
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MGQSQSGGHGPGGGKKDDKDKKKKYEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRL
KLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagagtcaaagtggtggacacggtcctggaggtggcaagaaggatgacaaagac
aaaaagaagaaatatgaacccccagttccaacccgagtggggaaaaagaagaagaaaaca
aagggaccagatgctgccagcaaacttccactggtcactcctcatactcagtgcagactc
aaattattgaagctggaaagaattaaggattatcttctgatggaggaagagttcattaga
aaccaggaacagatgaaacctttggaagaaaagcaagaggaagagagatcaaaggtggat
gatctgagagggactccaatgtctgtagggactttggaggagataattgatgataatcat
gctattgtgtccacatcggtgggctcagaacactatgtcagtattctttcttttgtagac
aaggatttgctagagccaggatgttcagttctacttaatcataaggtccatgccgtgatt
ggtgtcttgatggatgacacggatcctttagttacagtgatgaaagtggaaaaagcccca
caagagacatatgcagatattggaggcttggataaccaaattcaagaaatcaaggaatct
gtggaactacctttgactcatcctgagtattatgaagaaatgggaataaaaccacccaaa
ggggtcattctgtatgggcctcctggcacaggtaaaacgttattagccaaagccgtggca
aatcagacttctgccaccttcctgagagtggttggttctgaacttatccagaaatatttg
ggagatggaccaaagcttgttcgagaactttttcgagtagctgaagagcatgccccgtca
attgtcttcattgatgaaattgatgccataggtaccaaaaggtatgattctaactcaggt
ggagaaagggaaatccagagaacaatgctggagttactgaaccaactagatgggtttgat
tcacgtggcgatgtaaaggtgatcatggctactaacagaatagaaacattggatccagct
ttaatcagaccaggacgtattgacaggaagatagaatttcctctcccagatgaaaaaaca
aagaaacgcatcttccagattcacaccagcagaatgactttggcagatgacgttactcta
gatgagttgataatggcgaaagatgatctgtctggggcagatataaaggccatttgcacg
gaagctggtttgatggctctgcgtgaacgaagaatgaaagtaacaaacgaagacttcaaa
aaatcaaaagaaaatgttctttataagaaacaggaaggcactccagaaggcctctacctt
taa
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