Thamnophis sirtalis (common garter snake): 106541399
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Entry
106541399 CDS
T06107
Name
(RefSeq) sodium channel protein type 2 subunit alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsr04040
]
106541399
Ion channels [BR:
tsr04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
106541399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
GPHH
IQ
Neur_chan_memb
Lustrin_cystein
ATP-synt_B
DUF6739
Motif
Other DBs
NCBI-GeneID:
106541399
NCBI-ProteinID:
XP_013912318
UniProt:
A0A6I9XNK9
LinkDB
All DBs
Position
Unknown
AA seq
2006 aa
AA seq
DB search
MAQSVLVPPGPDSFNFFTKESLAAIEQRIAEEKAKKSKQERKDVDDDENGPKPNSDLEAG
KSLPFIYGDIPPGMVSEPLEDLDPYYVNKKTFIVLNRGKAIFRFSATSAVYLLTPFNPLR
KIAIKILVHSLFSMLIMCTILTNCVFMTMSNPPEWTKNVEYTFTGIYTFESLIKILARGF
CLENFTFLRDPWNWLDFTVITFAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVG
ALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCLLWPPDNSTYTINVVSYFNSS
MGENGTFVNTTVTTFNWEEYVRDDSHFYFLEGQNDALLCGNGSDAGQCPEGYMCVKAGRN
PNYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINL
ILAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAALAAAAGESREFSEIG
GVGGFSESSSATSKLSSKSAKERKNRRKKRKQREQSEGDEKDDEFHKSESEDSIRRKGFR
FSIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRSSKTSLFSFRGRAKDFGSENDFADDEH
STFEDNESRRDSLFVPHRHSERRNSTISQASRSSRVMPILPANGKMHSTVDCNGVVSLVG
GPPPLMSPTGQLLPEGTTTETELRKRRSSSYHMSMDFLSDPTARQRAMSIASILTNTMEE
LEESRQKCPPCWYKFANMCLIWDCWAPWLKIKHIVNLIVMDPFVDLAITICIVLNTLFMA
MEHYPMTQQFNNVLSVGNLVFTGIFTAEMFLKIIAKDPYYYFQEGWNIFDGIIVSLSLME
LGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAV
VGMQLFGKNYKECVCKISNDCELPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQP
MCLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVARIQKGIDFI
KRKAHECVEKAFVRKQKALDEIKPLEDLNNKKDSCISNHVIVDIAKDFNYLKDGNGTTSG
IGSSVEKYIIDESDYMSFINNPSVTVTVPIAVGESDFENLNTEEFSSESDLEESKEKLNA
SSSSEGSTVDVGLPPIGEQPEAEPEESLEPEACFTEGCIRKFKCCQVSLEDGKGKLWWNL
RKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTVLEYADKVFTYIFILEM
LLKWVAYGFQAYFTNAWCWLDFLIVDVSIVSLTANALGYSELGAIKSLRTLRALRPLRAL
SRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGEMFSI
DEVDNQTECENLIERNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNV
EQQPHYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKY
YNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQAFDISIMILICLNMVTMMVETDDQTD
AMETILYRINFIFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAEIIEK
YFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIF
GMSNFAYVKREVGIDDLFNFETFGNSMLCLFQITTSAGWDGLLAPILNSGPPDCDPEIDH
PGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEM
FYEVWEKFDPDATQFIEFAKLSDFAASLDPPLLIPKPNKVQLIAMDLPMVSGDRIHCLDI
LFAFTKRVLGESDEMDALRVQMEDRFMAANPSKASYEPITTTLKRKQEEVSAVIIQRAFR
CYLLRLKVKKVSCMFNKDRIKEGTVIKEDMIIDKLNDNSTPEKNDMTPSTTSPPSYDSVT
KPDKDKYEKDKSEKEDRGKDVRDYKK
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtcagtgctggtaccaccaggacctgacagcttcaacttttttacgaaagag
tcactggcagctattgaacaacgcattgccgaggaaaaggcgaagaagtccaagcaagaa
cgcaaagacgttgatgatgatgaaaatggaccaaaaccgaatagcgatttggaagctggc
aaatccctgccctttatatatggagacatacctccgggaatggtgtctgagccattggag
gacctggacccatattacgttaacaaaaaaacatttatagtattgaatagagggaaggca
attttccgattcagtgccacgtctgctgtgtacctgttaactcctttcaaccctcttaga
aaaatagctatcaagattttggtacattcattattcagcatgcttattatgtgcactatt
ttaaccaactgtgtatttatgaccatgagtaatcctccagaatggacgaagaatgtagaa
tacacgttcactgggatttatacctttgaatcactaataaaaattcttgcaaggggcttc
tgtttagaaaatttcactttcctccgggatccctggaattggttggacttcacagttata
acattcgcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttc
agagtattgagagctttgaaaactatttctgtaattccaggcctgaagacaattgtaggg
gccctcattcaatctgtgaagaagctctcagatgtcatgatcttgaccgtgttttgtttg
agtgtatttgcactaatagggctccaacttttcatggggaacctgaggcataaatgcctg
ctttggccaccggacaattctacttatacaataaacgtcgtttcctatttcaatagctca
atgggagaaaacggtacctttgtaaatacgacagtgaccacttttaactgggaagaatat
gtccgtgatgacagtcacttttacttcttggaaggacaaaatgatgctttgctgtgtggc
aatggttcagatgcaggtcaatgtccagaaggatatatgtgtgtaaaagctggtagaaac
cccaactatggctatacaagttttgataccttcagctgggccttcttgtcactatttcgg
ctgatgactcaggacttctgggaaaatctttaccaactgactctacgtgctgctggcaaa
acgtacatgatcttttttgtcctggtgattttcttgggttctttctacctgatcaacttg
atcctggctgttgttgccatggcttatgaagagcagaatcaagccaccatggaagaagct
gagcagaaagaggcagagttccagcagatgctggaacagctgaaaaaacagcaagaagag
gctcaggcagcagctttagccgccgccgctggtgaatcgagagaatttagtgaaattggt
ggtgtaggtgggttctcagagagctcttcagcaacatcaaagttgagttccaagagtgct
aaggagaggaagaacagacggaaaaagagaaaacagagagaacagtctgaaggagatgaa
aaagacgatgaatttcacaaatcagaatcagaggacagcatccgcagaaaaggctttcgg
ttctctattgaagggaacagattaacctatgaaaaaagattttcttccccacaccagtct
ttgctgagcatccgcggatcgctgttttcccccaggcgcagcagcaaaacgagcctcttc
agcttcagaggccgagcaaaggattttggatcggagaatgattttgctgacgatgagcac
agcacttttgaagacaacgagagtaggagagattccctctttgttcctcaccggcacagt
gagcgtcgcaacagtaccatcagtcaggccagccgatcatctagggtgatgcctatcctt
ccagcaaatgggaagatgcacagcactgtggactgcaatggggtggtttccttagttggt
gggcctcctcctcttatgtcacccactgggcagcttcttcctgagggtaccaccacagaa
acagaactaagaaaaagacgctccagttcctaccacatgtcaatggattttctctcagat
cctactgcaaggcaaagagcaatgagtatagctagcatacttaccaacacaatggaagaa
cttgaggaatccagacagaagtgccctccctgctggtacaaatttgctaacatgtgctta
atctgggattgctgggctccttggctgaaaataaagcatattgttaatttgattgtgatg
gatccgtttgtggaccttgctattaccatctgcattgttttaaatactttgtttatggca
atggaacattacccgatgactcaacagtttaataatgtgctctccgttggaaacttggtg
tttactggcatcttcacagcagaaatgtttctcaaaataattgccaaggatccttattat
tatttccaagaaggctggaatattttcgatggcatcatagtcagcctgagcttgatggag
ttgggtcttgcaaatgtggaagggttgtctgttctaagatccttcagattgctgcgagtt
ttcaaactggcaaaatcttggccaacattaaacatgttaataaagattattggcaattca
gttggtgccttgggaaatttgactttggttttggctatcattgtcttcatttttgctgtg
gttggaatgcagttgtttggcaaaaactacaaggaatgtgtctgcaagatttccaatgac
tgtgaactcccacgctggcacatgaatgatttttttcattctttcttgattgtctttcga
gttctttgtggagaatggatagagactatgtgggattgtatggaggttgctggacaaccc
atgtgccttactgtcttcatgatggtcatggtgattggcaatttagtggttttgaatctt
tttctggccttgctcctgagctccttcagttcagacaatcttgctgctacagatgatgat
aatgaaatgaacaacctccaaattgcagtggctaggattcagaaaggaatagattttata
aaaagaaaagctcatgaatgtgtagaaaaggcgtttgtgagaaaacaaaaggctttggat
gaaatcaagccccttgaagatctaaacaataagaaagacagttgcatttctaatcatgtg
atagtagatattgccaaagattttaactatctgaaagatggcaatgggactaccagcggc
ataggaagcagcgtggaaaagtacatcattgatgaaagtgattacatgtcattcataaat
aacccaagtgtaactgtgacagtacccattgctgttggagaatcagattttgaaaattta
aatacggaggagtttagcagtgagtcagatctggaagaaagtaaagagaaactaaatgca
tctagttcatctgaaggtagtacagttgatgttggacttcccccaattggagaacaacct
gaagctgaacctgaagaatctcttgaaccagaagcctgttttacagaaggctgcatccgg
aaattcaagtgctgccaagtcagtttagaagatgggaaaggaaaactgtggtggaatctt
cggaagacttgttacaaaatcgtagaacataattggtttgagacttttattgtcttcatg
attctccttagcagtggtgctctggctttcgaagacatatacattgagcagcgcaagact
atcaagacagtcctggaatacgcagacaaggtcttcacctacatcttcattttagaaatg
cttctgaagtgggtggcttatggctttcaagcctatttcaccaatgcctggtgctggcta
gatttcctcattgttgatgtctctatcgttagcttaacagcgaatgccttgggctactct
gaacttggtgcaattaaatctcttaggactttaagagctttaagacctctaagagccttg
tcacggttcgaaggaatgagggtagtggtgaatgctctcttgggagcaattccatctatc
atgaatgtgctccttgtatgtcttatattctggctaatctttagcattatgggagtgaat
ctgttcgctggcaagttctaccactgtgttaacaccacaactggggaaatgttcagcatt
gatgaagttgacaatcagactgaatgtgagaatctcatcgaaagaaatgaaacagctaga
tggaaaaatgtaaaagtcaatttcgataatgtgggacttggctacctctctctgcttcaa
gtagccaccttcaaaggctggatggacatcatgtacgcagctgtagattcacgaaatgtg
gaacagcagccacattacgaggataacctttatatgtatctttattttgtcatctttatt
atctttggatccttcttcactttgaatttatttattggtgtcatcatagataacttcaat
cagcaaaaaaagaagtttggaggtcaagacatctttatgacagaagaacagaaaaaatac
tataatgcaatgaaaaaactgggctccaagaaaccacagaaacctataccaaggccagca
aacaaatttcaaggcatggtctttgattttgtaacaaaacaagccttcgacatcagcatc
atgattcttatctgccttaacatggttaccatgatggtagaaactgatgaccaaaccgat
gcaatggaaactattttgtatcggattaattttatcttcattgtccttttcactggagaa
tgtgtcttgaaactgatttcactccgctattattattttacaataggctggaatattttt
gattttgtggttgtcatcttatctattgtaggtatgttcctcgcagagattattgagaaa
tattttgtgtcccctaccttgttccgagtaattcgacttgccaggataggtcgaatcctg
cgtctaatcaagggggcaaaggggatccgcactctgctttttgccttgatgatgtctctc
cctgccttgttcaacattggtctcctgcttttcctggtcatgttcatctatgccatattt
ggaatgtccaactttgcctatgtgaagagagaagttggtattgatgacttgttcaatttt
gaaacttttggcaacagcatgctttgtcttttccaaattaccacctctgctggctgggat
ggcttgctagcgcccattctaaacagcgggcctccagattgtgaccctgagatagaccat
ccgggtagctcagtcaagggagactgtggcaatccttcggttgggattttcttctttgtc
agctacattatcatctcatttttagttgtagtgaacatgtacattgctgtcattttggag
aacttcagtgtggctaccgaagaaagtgctgaacctctgagcgaggatgattttgagatg
ttctatgaagtctgggaaaagttcgatccagatgcaacccagttcatagaatttgccaaa
ctctctgattttgcagcctctttggatcctcctcttctaataccaaaaccaaacaaagtt
cagcttattgcgatggacctgcccatggtgagtggcgatagaatccactgccttgacatc
ttatttgctttcaccaaacgtgtcttgggtgaaagcgatgaaatggacgccctccgagtg
caaatggaagaccggtttatggctgccaacccttccaaagcctcttatgaaccaattacc
accacattgaaacgaaaacaagaggaagtatccgctgttattattcagcgagcctttagg
tgctacctcttaaggctaaaagttaaaaaagtttcctgcatgtttaataaagatagaatt
aaagaaggcacagttatcaaagaagatatgatcattgataagctaaatgacaattctacc
cctgaaaaaaacgatatgaccccctccaccacctctccaccttcctacgatagcgttaca
aagcccgacaaagataaatatgagaaagacaaatcagaaaaagaagatagaggtaaagat
gtcagggactataaaaaataa
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