Thamnophis sirtalis (common garter snake): 106544187
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Entry
106544187 CDS
T06107
Symbol
ITGB1
Name
(RefSeq) integrin beta-1
KO
K05719
integrin beta 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04145
Phagosome
tsr04510
Focal adhesion
tsr04512
ECM-receptor interaction
tsr04514
Cell adhesion molecules
tsr04530
Tight junction
tsr04810
Regulation of actin cytoskeleton
tsr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
106544187 (ITGB1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106544187 (ITGB1)
04514 Cell adhesion molecules
106544187 (ITGB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106544187 (ITGB1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
106544187 (ITGB1)
04530 Tight junction
106544187 (ITGB1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106544187 (ITGB1)
04810 Regulation of actin cytoskeleton
106544187 (ITGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106544187 (ITGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsr04147
]
106544187 (ITGB1)
04515 Cell adhesion molecules [BR:
tsr04515
]
106544187 (ITGB1)
04090 CD molecules [BR:
tsr04090
]
106544187 (ITGB1)
Membrane trafficking [BR:
tsr04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
106544187 (ITGB1)
Exosome [BR:
tsr04147
]
Exosomal proteins
Proteins found in most exosomes
106544187 (ITGB1)
Cell adhesion molecules [BR:
tsr04515
]
Integrins
Integrin beta subunits
106544187 (ITGB1)
CD molecules [BR:
tsr04090
]
Proteins
106544187 (ITGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
106544187
NCBI-ProteinID:
XP_013915862
UniProt:
A0A6I9XPE0
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MRFRRRRGSSGVGGSGRLLSWVCHTGGRSGGARDLPDAAPERRPGPAGKGQEGAFPRLQP
ACPPGQRRTPAMAPIHFPSLLLVGILNCFILYGLAQQSGSICINANAKSCADCIQAGPNC
GWCKNITFLQEGESTAARCDDLDALKNKGCPPEEIENPRGTHILLKNKEVTNRIKGTAET
LRPEDITQIQPQQVLLKLRKGEPQTFSLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSL
GTSLMSKMKNITSDFRIGFGSFVEKTVMPYISTTPAKIRNPCTGDLNCTSPFSYRNVLNF
TSNGSSFNTLVGEQQISGNLDSPEGGFDAIMQVAVCGSRIGWRRNVTRLLVFSTDAGFHF
AGDGKLGGIVLPNDGQCHLENNMYTMSHYYDYPSIAHLVQKLSDNNIQIIFAVTEEFQPV
YKELKNLIPKSAVGMLSSNSSNVIQLIIDAYNSLSSEVILENNKIPKEIGIEYKSFCKTG
VNGTGDEGRKCSNISIGDEVRFEITITANQCPEKGQNETIKIKPLGFTEEVEINLEFICE
CECHNEGIEDSPKCHFGNGTFECGACRCKPGRIGKHCECSMEEVNSEDMSGTCRQANSSE
ICSNNGECICGQCVCKKRENPNEIYSGPYCQCDNFSCDRSDGLICGGHGECKCQECECWE
NFTGSACECPLDTTPCEAANGQICNGRGICECGECNCTDSKFQGPTCELCQTCLGVCAEH
KDCVQCKAFNKGEKKERCEKECSHFSLELVDRREKLPQPGQYDPSTHCKEKDIDDCWFYF
TYSVDSNNKAIVHVVKTPECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREF
AKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYEGK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttccggaggcgaagagggagcagcggcgttggcgggtctggccgtctcctttcc
tgggtctgccacacggggggaaggagcggaggcgcgagggacctgccggacgccgccccg
gagagaagaccaggcccggctgggaagggccaagaaggagctttcccgcgcctccagcca
gcttgtcctccaggccagaggcgaaccccggccatggcaccgatacatttcccttctctt
ctcttggttggaatattaaattgcttcatactgtatggacttgcccaacaaagtgggagc
atttgtataaatgctaatgcaaaatcatgtgctgattgtatacaagctggcccaaattgt
ggatggtgtaaaaatataacttttttgcaagaaggagaatctacagcagcacgatgtgat
gacttggatgctttaaaaaataaaggctgccctccagaagaaattgaaaaccccagaggc
acacatatattgctaaaaaacaaagaagtaacaaatcgcatcaaaggcactgctgaaact
cttagaccagaagatattacccagattcaaccacagcaagtgctgttaaagctgcggaaa
ggggaaccacagacattttcattaaaattcaagagagctgaagattatccaattgacctt
tattacctcatggatctgtcctactctatgaaagatgacttggaaaatgtcaaaagcctt
ggaacttctctgatgagtaaaatgaaaaatataacttcagattttcgaattggctttggt
tcttttgttgaaaaaacagtaatgccttatatcagtaccacacctgccaaaatcaggaat
ccctgcacaggtgacctcaactgtacaagtccgtttagctacaggaatgtactcaacttt
accagcaatggaagctcgttcaatacacttgtaggggaacagcaaatctcaggcaatttg
gattctccggaaggaggatttgatgcaataatgcaggttgctgtttgtggttcaagaatt
ggatggagaagaaatgtcactcgactattggttttttccactgatgctgggttccatttt
gctggagacgggaagcttggcggaattgttttaccaaatgatggacaatgtcatttagaa
aataatatgtacacaatgagtcattactatgattatccctctattgcccatcttgttcag
aagctaagtgacaataatatccagataatatttgctgtgacagaggaatttcagccagta
tacaaggagttgaagaatttgattcctaaatctgcagtgggaatgctgtcttcaaactca
agtaatgtgattcagctgatcatagatgcttacaattcattgtcttcagaagttattttg
gaaaacaataaaattcctaaggagataggaatagaatataagtctttctgtaaaaccgga
gtgaatggaacaggagatgaaggaagaaagtgctctaacatttcaattggagatgaggtt
aggtttgagattacaataacagctaaccaatgtccagaaaaaggacaaaatgaaacaatt
aaaatcaaacctcttggtttcactgaagaagtagagattaatctggagttcatttgtgaa
tgtgagtgccataatgaagggattgaggacagccctaagtgccattttggaaatggaaca
tttgagtgtggtgcttgcaggtgcaaacctgggcgtattggaaagcactgtgaatgcagc
atggaagaagtaaatagtgaagacatgtcaggcacctgtaggcaggctaacagttctgaa
atatgtagcaacaatggcgaatgtatttgtggacagtgtgtgtgcaaaaagcgagaaaat
ccaaatgaaatctattctggcccatactgccagtgtgataacttcagctgtgatcgatct
gatggtttaatttgtggaggacacggtgaatgtaaatgtcaggaatgtgaatgctgggaa
aatttcactggctctgcttgtgagtgtcctctagatacgactccttgtgaagctgcaaat
gggcaaatctgcaatggtagaggaatatgtgaatgtggagaatgcaactgtaccgattcc
aaatttcagggaccaacctgtgagctatgtcagacttgtcttggcgtctgcgcagagcac
aaagattgtgtccagtgcaaagcctttaacaaaggagagaagaaggagcggtgtgaaaaa
gaatgttcacacttcagtttggagttggtcgatcgcagagagaaattgccacagcctgga
cagtacgatccatcgactcactgcaaggagaaggatattgatgactgttggttttatttc
acatattctgttgattcaaataacaaggctattgtccatgtggtgaagacaccagaatgc
ccaactggtcctgacatcattcctatagttgctggtgtggtcgctggaattgttcttatt
ggtctagctttattgctgatttggaagttacttatgatcattcatgacagaagagaattt
gcaaaatttgagaaagaaaagatgaatgcaaaatgggatacgggtgaaaatcctatatac
aaaagtgctgtgacaactgtagtgaatcctaagtatgaggggaaatga
DBGET
integrated database retrieval system
