Thamnophis sirtalis (common garter snake): 106547289
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Entry
106547289 CDS
T06107
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B-like
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04020
Calcium signaling pathway
tsr04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
106547289
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106547289
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsr04040
]
106547289
Ion channels [BR:
tsr04040
]
Ligand-gated channels
Glutamate (ionotropic)
106547289
BRITE hierarchy
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GFIT
Motif
Pfam:
NMDAR2_C
SBP_bac_3
Lig_chan
SrfB
Motif
Other DBs
NCBI-GeneID:
106547289
NCBI-ProteinID:
XP_013919876
UniProt:
A0A6I9Y0N5
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All DBs
Position
Unknown
AA seq
843 aa
AA seq
DB search
MKRFCLVTLGLLAPAFLIAGIALLAAHIMENLVDGQIKQVRSRRARIIPGREKVGVGVSL
KEWLRSLLWKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKNSGWKRQ
VDLAILQLFGDGEMEELEALWLTGICHNEKNEVMSSQLDIDNMAGVFYMLGAAMALSLIT
FICEHLFYWQFRHCFMGVCSGKPGVVFSISRGIYSCIHGVAIEDHHSSMNSPTATMNNTH
SNILRLLRTAKNMANLSGVNGSPQSALDFIRRESSVYDISEHRRSFTHSDCKSYNNPPCE
ENLFSDYISEVERTFGNLQLKESNVYQDHYHHHHRPHSIGSASSIDGLYDCDNPPFSSQS
RSISKKPLDIGLPPAKHGQLGDLYGKLSFKGDRYSGGGAHDDLIRSDVSDISTHTVTYGN
IEGNAAKRRKQQYKDSLKKRPASAKSRREFDEIELAYRRRPHSPDHKRYFRDKEGLRDFY
LDQFRAKENSPHWEHVDLTDIYKERGDDFKRDTLGGTGTCSNRTHHKHGSGEFGVNNEHK
HSVVSGVPVPWEKNLANLDWEERPGSNYCRSCPSKLHNYTPAVVGQNSTRQPCIRCEACK
KAGNLYDISEDNSLQELDQPSAPVPVATSTSTTKYPQSPSNSASKVQKKNRNKLRRQHSY
DTFVDLQKEEAALAPRSVSLKDKGRFLEGSPYAHMFEMPASESTFANNKSSLPATSHHHH
NNPGISGGYMLSKSLYPDRVTQNPFIPTFGDDQCLLHGSKSYFFRQPVVAGGPKARPDFR
AIVTTNKPVVSALHGAVPARFQKDICIGNQSNPCVPNNKNPRAFNGSSNGHVYEKLSSIE
SDV
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcttctgcctggtcacgctgggcttgctggcgccggccttcctcatcgccggc
atcgccctcctggcggcccacatcatggagaacctggtggacggccagatcaagcaggtc
aggagccgccgggcgcgcatcatccccggcagggaaaaagtgggggtgggagtgtcgctt
aaggaatggttgcgtagtcttctttggaaactggatgcttttatttatgatgctgctgtg
ctaaactatatggctggcagagatgaaggctgcaagctagtgacaattggcagtggaaag
gtctttgcttctactggctacggcattgccatccagaagaactctggctggaagcggcaa
gtggatcttgcaattttacagctttttggcgatggggagatggaggaactagaagctctc
tggctcactgggatttgccacaatgagaagaatgaggtaatgagtagtcagctggatatt
gacaacatggcaggagtcttctatatgttgggagcagccatggccctcagcctcatcacc
ttcatctgtgaacatctcttttattggcaatttcgccattgcttcatgggggtctgttct
ggcaagcctggtgttgtcttctccattagcaggggtatttacagctgcatccatggagtg
gctattgaagaccatcattcttctatgaattctcctactgccaccatgaacaatacccat
tctaatattttgcgtctgctccgaacagcaaagaacatggctaacctttcaggtgtcaat
ggatcaccacaaagtgccctggatttcatccgccgtgaatcatcagtttatgatatctct
gaacatcgccgtagcttcacccactctgattgcaagtcttataataaccccccttgtgag
gagaatcttttcagtgattatattagtgaggtagaaaggactttcggcaatctacaactg
aaagaaagtaatgtttatcaagaccattatcatcatcatcatcgcccccatagcattggt
agtgccagttctattgatggactatatgactgtgataatccacccttctcttcccagtct
cgatccatcagtaaaaagccactagatattggtttaccaccagccaagcacggccagtta
ggtgacctttatggcaagctgtcattcaagggtgatcgatatagtggaggaggggcacat
gatgatttaatccgttcagatgtttcagacatatccactcatacggtaacatatggcaac
atcgaaggcaatgcagcaaagcggagaaaacagcaatataaagatagtttaaagaaacgt
ccagcctcagctaaatcacggagagaatttgatgagattgaactggcctatcgacggcgt
ccccattctcctgaccacaagcgctactttagagacaaggaagggctaagggatttctat
ttggaccaattccgggctaaggaaaactcaccgcattgggaacatgtagatctgacagat
atctataaagaacggggagatgactttaagcgggacactctagggggaacagggacgtgt
tcaaataggacccatcacaaacatgggtcaggggagtttggagtaaacaatgagcacaag
cacagtgttgtgagtggggtaccagtgccatgggaaaaaaaccttgccaatcttgattgg
gaggaacggccagggtctaattattgccgcagttgcccatctaagctgcataactacacc
ccagctgtggtggggcagaactccacccgtcagccatgcatccggtgtgaagcttgcaag
aaggcaggcaacctctatgatatcagtgaggacaactcccttcaagagctggatcagcca
tctgctcctgtgccagtggcaaccagcacctccaccaccaagtaccctcagagcccttcc
aactctgcctccaaggtgcagaaaaagaatcgcaacaagctccgccggcagcactcctat
gacacatttgtggatctgcagaaggaagaagcagccttggccccacgcagtgtgagctta
aaggacaaaggccgctttttggagggaagcccttatgctcatatgtttgaaatgccagca
agcgagtccacttttgccaacaacaagtcctcactgcctgccaccagccaccaccaccac
aacaatcctggcattagtggtggttatatgctaagcaagtctctctaccccgatcgggtc
actcaaaaccctttcatccccacttttggggatgaccagtgcttgctccatggcagcaaa
tcctatttcttcaggcagcctgtggtggcaggagggcccaaggccaggccagacttccga
gccattgtcaccaccaacaagccagtggtctcagctcttcatggagctgtgccagcccgt
ttccagaaggacatctgtatagggaaccagtccaacccctgtgtgcctaacaacaaaaac
cccagggctttcaatggctctagcaatgggcatgtttatgagaaactttctagtattgaa
tctgatgtctga
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