Thamnophis sirtalis (common garter snake): 106548079
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Entry
106548079 CDS
T06107
Name
(RefSeq) ruvB-like 2 isoform X1
KO
K11338
RuvB-like protein 2 [EC:
5.6.2.3
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106548079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106548079
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tsr03037
]
106548079
Enzymes [BR:
tsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
106548079
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
106548079
Chromatin remodeling factors
SRCAP complex
106548079
INO80 complex
106548079
INO80 complex (yeast)
106548079
SWR1 complex
106548079
ASTRA complex
106548079
Cilium and associated proteins [BR:
tsr03037
]
Motile cilia and associated proteins
Dynein assembly factors
106548079
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
DnaB_C
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_19
nSTAND3
Sigma54_activat
ATPase
Mg_chelatase
AAA_25
MS_channel_2nd
Zeta_toxin
SLFN-g3_helicase
TsaE
AAA_17
bpMoxR
AAA_7
AAA_23
AAA_11
GvpD_P-loop
NACHT
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
106548079
NCBI-ProteinID:
XP_013920873
UniProt:
A0A6I9Y1U9
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MATAAATKVPEIRDVTRIERIGAHSHIRGLGLDDTLEPRQVSQGMVGQLAARRAAGVILE
MIKEGKIAGRAVLIAGQPGTGKTAIAMGMAQALGLDTPFTAISGSEIFSLEMSKTEALTQ
AFRRSIGVRIKEETEIIEGEVVEIQIDRPATGSGAKVGKLTLKTTEMETIYDLGTKMIES
LTKEKVQAGDVITIDKATGKITKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHT
VSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEVIPGVLFIDEV
HMLDIECFSFLNRALESDMAPVLIMATNRGITRIRGTNYQSPHGIPIDLLDRMLIISTSP
YSDKETKQILKIRCEEEDVEMNEDAYTVLTRIGLETSLRYAIQLITAANLVCRKRKGTEV
QVDDIKRVYSLFLDESRSTQYMKEYQDAFMFNELKGETMDTT
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggccgcggctacaaaagttcctgaaattcgcgatgttacccggattgagcgt
attggagctcattcccacattcgaggacttggcttggatgataccttggaacccagacag
gtatcccagggcatggtaggacagttggctgctcgtcgagctgctggggtgattttggaa
atgataaaggaaggcaaaattgctggtcgggctgtcttgattgccggccagccaggcaca
ggaaaaacagccattgccatgggcatggcccaagcactgggtcttgacactccttttaca
gcaatttctgggagtgaaatcttctctttggagatgagcaaaactgaggcactaactcag
gcctttcggcgttccattggtgtccgcattaaggaagaaacagagataattgaaggtgaa
gttgttgagattcaaatagatcgtccagcaactggttctggtgccaaagttgggaagttg
accttgaaaactacagagatggagacgatctatgatttgggcaccaagatgatagagtca
ctgactaaggagaaagtgcaagctggggatgtcattactatagacaaagctacaggaaag
attaccaaactaggacgttccttcacacgggcccgggattatgatgcaatgggctctcag
acaaagtttgtgcagtgccctgatggagaactgcaaaagcgcaaggaagtcgtgcataca
gtctcactacatgaaattgatgtcatcaatagccgcactcaaggatttctggcgctcttt
tctggtgacacaggagaaataaagtcagaagtacgggagcagatcaatgcaaaggtagca
gaatggcgagaagaaggcaaagctgaggtgatccctggggttctcttcattgatgaagtc
catatgctggatattgagtgcttctcctttcttaatcgagccctggaaagtgacatggca
cctgtcctcatcatggccaccaatcgtggcataaccaggattcgtggcaccaactatcaa
agcccccatggcattcctattgacctgctggatcgtatgctgattatttcaacctctcca
tacagtgataaggagacaaaacaaatattgaaaatccggtgtgaagaggaagatgttgag
atgaatgaagatgcctacacagtattaacccgcattggtttggagacttccttgcggtat
gccatccagctcattacagcagccaacttggtgtgtcgcaaaagaaagggcacagaagtt
caggttgatgacatcaagcgtgtatactccctgttcctggatgagtcacgctccactcaa
tacatgaaagaatatcaagatgcttttatgtttaatgaactcaaaggggagaccatggat
acaacatga
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