Thamnophis sirtalis (common garter snake): 106552551
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Entry
106552551 CDS
T06107
Name
(RefSeq) transcription initiation factor TFIID subunit 1-like
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106552551
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tsr01001
]
106552551
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsr03021
]
106552551
03036 Chromosome and associated proteins [BR:
tsr03036
]
106552551
Enzymes [BR:
tsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
106552551
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
106552551
Protein kinases [BR:
tsr01001
]
Serine/threonine kinases: Other
TAF1 family
106552551
Transcription machinery [BR:
tsr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106552551
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
106552551
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
Bromodomain
zf-CCHC_6
Cac1_C
Motif
Other DBs
NCBI-GeneID:
106552551
NCBI-ProteinID:
XP_013926335
UniProt:
A0A6I9YRU6
LinkDB
All DBs
Position
Unknown
AA seq
977 aa
AA seq
DB search
MEDIKKAFPSHSESSIRKRLKLCADFKRTGLDSNWWVLKPDFRLPTEEEIRAMVSPEQCC
AYYSMISAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKC
LLEVTGVADPTGCGEGFSYVKIPNKPTQQKQDDKEPQPVKKTVTGTDADLRRLSLKNAKQ
LLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEE
CQRIFDLQNKVLESTEILSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQE
RKELQRMLMGEDGDKDRSKKDRRDKKGAVPTPGNMGGCHKDDDTASVTSLNSSATGRRLK
IYRTFRDEDGKEYVRCETVRKASVIDAYSRIRTTKDDEFMFQVKLNPCGVAKEQSRVGKL
EQPFPGLLRSLQPPLIVSLPVLFQRPHKSIHRRRTDPMVTLSSVLESIINEMRDLPNTYP
FHQPVNGKVVKDYYKIITKPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKH
SLTQISQSMLDLCDQKLKELKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEE
LEKTVIPNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGTTV
HCDYLNHTLGSSLSQSRVLGSAWLREREGGARFRKPLGKLASHLHSRDSDFLLSNALQPP
DLYDTNTSLSMSRDASVYQDESNLSAMDTPTTTPEKQSAQMPQGQGRLGEEDSDVDIEGL
DEDEDGKPKTPAPEAEDVDGDLADEEEGLVQQPQASVLYEDLLMSDGEDDDGSDEEEGDN
PFSSIQLSESGSDSDVEPSAVRPKQPHVLQENTRMGMDNEESMMSYEGAGEEASHAMEDS
NASYGSYEEPGPKSNTRDASFSSLGGYEFSEEEEEEEEEEGQRCGPSVLSQVHLSEDEDD
SEDFHSIAGDSDLDSDE
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggaggatatcaagaaggcgttcccttcccactccgagagcagcatccggaagcggctg
aagctctgcgcagatttcaagcgcaccgggctggactccaactggtgggtcctgaaaccc
gacttccggctgccaaccgaggaggaaatccgagcgatggtgtctccggagcagtgctgt
gcctattacagcatgatttccgctgagcagcgcctgaaggatgcaggttacggagagaaa
tccttttttgcccccgaggaagagaacgaggaggatttccagatgaagatcgatgacgag
gtgcgcacggctccctggaacaccacccgggctttcattgcagccatgaaagggaaatgc
ctcctcgaggtcaccggggtagcagacccaacagggtgtggcgaaggcttctcctacgtc
aagatcccgaacaagccgacgcagcagaagcaggatgacaaggagccacaaccggtgaag
aagacggtcacggggacagacgccgacctccggcgcttatccctgaaaaacgccaagcag
ctcctgcgcaagtttggagtccccgaagaggagatcaagaagctttcccgctgggaagtg
atcgacgtcgtgcggacaatgtccaccgagcaggctcgctcaggcgagggtcccatgagt
aagtttgcccgagggtcccgcttctctgtggcagagcaccaggagcggtacaaggaggaa
tgccagcgcatttttgacttgcagaacaaagtcctggagtccaccgagatcctgtcgacg
gacaccgacagcagctccgccgaagacagcgacttcgaggaaatggggaagaacatcgag
aacatgctccagaacaagaagaccagctcccagttgtcccgggagagggaggagcaggaa
cggaaggagctgcagcgcatgttgatgggggaagacggcgacaaggaccggtccaagaag
gaccggagggacaagaaaggggcggttcccactcctggcaacatggggggttgtcataaa
gacgacgacacggcctccgtgaccagcctcaactcctcggccactgggcgccgcttgaaa
atctatcgcactttccgtgacgaggacgggaaggagtacgtgaggtgtgagacggtgcgt
aaagcctcagtcatcgacgcctacagccggatcaggaccaccaaagatgacgagttcatg
ttccaagtaaagctgaatccttgcggtgtagcaaaggagcaaagtcgggtcgggaaatta
gagcagccgtttcccgggctcttgcgaagtctgcagcccccgttgatagtctcgcttccc
gtcttgtttcagcggccccacaagtccatccaccggcgacgcacagaccccatggtgacc
ttgtcttccgtcctggaaagcatcatcaacgagatgcgggatctccccaacacgtacccc
tttcaccagcctgtgaatgggaaggtggtgaaagattactataagatcattaccaagccg
atggacctgcagaccctccgcgagaacgtccgcaagagactttacccatctcgcgaagag
tttcgggaacacctggagctgattgtgaagaacagcgctacctacaacgggccaaagcac
tccttgacccagatttctcagtcaatgttggacctctgtgaccagaaactgaaagagttg
aagtgtggggcctgtggggccattgggcacatgaggaccaacaagttctgccctctgtac
taccaaaccaacgctcccccctccaacccggtggccatgacggaggagcaggaggaggag
ctggagaagaccgtcatccccaacgacaacgaggagctgatcaaagtggaggggaccaag
atcgtcttggggaagcagctgattgagagcgctgacgaggttcgcaggaagtccttagtc
ctgaagtttcccaaacagcagcttccccccaaaaagaagcggcgggttgggacaacggtg
cactgtgactacttaaaccacactctgggctccagcctctcacagtcaagagtgcttggt
tcagcatggctaagagaaagggagggaggagctcgtttccggaagcccctcgggaagctg
gcctctcacctgcactcccgtgactccgatttcctcctttcaaacgccctgcagccaccc
gatttgtatgacaccaacacctcgctcagtatgtcccgggatgcctccgtctaccaagat
gagagcaacctgtctgccatggacacgcccaccacgacacccgaaaagcagtccgcacag
atgccgcagggccaaggtaggctgggcgaggaagactctgacgtagatattgaagggttg
gatgaggatgaggatgggaaacctaagactccagccccagaagcggaggacgtggatggg
gacctggccgatgaggaagaaggcttggttcagcagcctcaggccagcgtgctctatgaa
gatttgctcatgtcagatggggaggacgacgacggcagcgatgaggaggaaggcgataat
cccttttcgtctattcagcttagcgagagtgggagcgattctgatgtggagcccagtgca
gttcggcccaagcagcctcacgtcctgcaagagaacacgcggatgggcatggacaacgag
gagagcatgatgtcctacgagggagctggagaagaggcctctcatgccatggaagacagc
aacgccagttacgggagctacgaggagccaggcccaaagtccaacacgcgagatgccagt
tttagtagcctgggcgggtacgagttctccgaagaggaggaggaggaggaagaggaggaa
gggcagcgatgcggccccagcgtcctcagccaggtccatctgtcggaggacgaggacgac
agcgaggacttccactccatagcgggagacagcgatctggattcggacgagtga
DBGET
integrated database retrieval system
