Treponema succinifaciens: Tresu_1301
Help
Entry
Tresu_1301 CDS
T01461
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tsu
Treponema succinifaciens
Pathway
tsu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tresu_1301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsu03019
]
Tresu_1301
03009 Ribosome biogenesis [BR:
tsu03009
]
Tresu_1301
Enzymes [BR:
tsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Tresu_1301
Messenger RNA biogenesis [BR:
tsu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Tresu_1301
Ribosome biogenesis [BR:
tsu03009
]
Prokaryotic type
rRNA helicases
Tresu_1301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
UTP25
PhoH
AAA_7
TsaE
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEB14209
UniProt:
F2NRX3
LinkDB
All DBs
Position
1395396..1396562
Genome browser
AA seq
388 aa
AA seq
DB search
MNKFLELKVDESIVSKLEEIGITEPTEVQKKIIPLISEGKNIMFQSETGTGKTFAYLLPL
LSRLNSTENRMARFMIASPTYELASQIKVQVQKISGIKCALLIGGAPISRQIELLKEKPE
IVIGGPARLLELIHLKKLKADGIETLVLDEADRLLSPELRDSTKGLMERLPKSVQLIGNS
ATVSKYTREILQKARNGILNDEKENAILFVALPMENVLRKQISHWAIFSERRDKIDTLRS
FINAEKPKKLLVFTSKSDQIENIASKLRFKKIDCETLCGKTNKVDRKSAIDRFRSGKTKI
LITTDLASRGLDIEGITHVVQMDLPEKEDFFIHRAGRTARAGATGINCVIGDAWEMENYA
RLEKKLKITVFPKMLYKGNVVDPNSFNT
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatttttagaactaaaagttgacgagtcaattgtttcaaagcttgaagaaatc
ggcataacagaacctacagaagtgcagaaaaaaataattccgcttatttcagaaggaaaa
aatataatgttccaaagtgaaaccggaactggaaaaactttcgcatatctgctcccattg
ctgagccgtttgaattccacggaaaatagaatggcgcgatttatgattgcatccccgact
tacgagcttgcttcccagataaaagttcaggtgcagaaaatcagcggaataaaatgcgcc
ctgctgattggaggtgcgccaatttcacggcaaatcgagcttttaaaggaaaagcctgaa
attgtaattggaggtcccgcgcggcttcttgagctgattcatttaaaaaaactcaaggcg
gacggaatagaaactcttgttcttgacgaggctgaccggcttttaagtcctgaactcagg
gacagcacaaagggtcttatggagcgtcttccaaaatcagttcagcttataggaaattcc
gccactgtaagcaaatatacgcgcgaaattcttcagaaagcaagaaacggaattttaaat
gatgaaaaggaaaacgcgattctttttgttgcgcttccgatggaaaatgttcttaggaaa
caaatttcgcattgggcaattttttcagaaagaagagataaaatcgacacgctgcgaagt
tttataaatgcagaaaaaccaaaaaaacttctcgttttcacttcaaaatccgatcagatt
gaaaacatcgcttcaaaattaagattcaaaaaaatcgactgcgaaaccttatgcggaaaa
acaaacaaagttgacagaaaatcagcaatcgacaggttcagaagcggaaaaacaaaaatt
ctcattacaacagaccttgcttccagaggacttgacattgaaggcataactcacgttgtc
cagatggatttgccggaaaaagaagacttttttattcaccgcgcaggaagaacagcccga
gccggagcaactggaataaactgtgtaatcggagacgcctgggaaatggaaaactatgcc
cgccttgaaaaaaaacttaagataacggtttttccaaaaatgctttataaaggtaacgtt
gtcgatccaaattcctttaatacttga
DBGET
integrated database retrieval system