KEGG   Candidatus Thiodictyon syntrophicum: THSYN_23305Help
Entry
THSYN_23305       CDS       T05211                                 

Definition
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
tsy  Candidatus Thiodictyon syntrophicum
Pathway
tsy00550  Peptidoglycan biosynthesis
tsy01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:tsy00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    THSYN_23305
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    THSYN_23305
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:tsy01011]
    THSYN_23305
Enzymes [BR:tsy01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     THSYN_23305
Peptidoglycan biosynthesis and degradation proteins [BR:tsy01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   THSYN_23305
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Transpeptidase PBP_dimer
Motif
Other DBs
NCBI-ProteinID: AUB83584
UniProt: A0A2K8UDB6
LinkDB All DBs
Position
complement(5531596..5533470)
Genome map
AA seq 624 aa AA seqDB search
MRLDSHLADRQREWRLVGARAIVAAVLVLAALSLVVVRLARLQIADHEHFSVLSQENRVK
VQPVPPSRGLIYDTKGVVLADNHPSFSLEITVEKVENLSATIDALAAIIRVDDKDRERFR
RLKGQRVRFQGVPLRLNLTPEEVARFSLDSYRFPGVDVRAELIRSYPHGELTAHVLGYVG
RINREEMDHIDTSAYAGTHFIGKGGVEKYHEGLLHGQAGYQQVEVNARGRVLRTLEGKSP
VAGQDLHLFLDIALQRAATEALGDNRGAVVAIDPRTGGVLALVSKPSFDPNPFVEGIGSA
DYHALLYSPDKPLYNRAVRGQYPPGSTVKPFVGFAGLAAGVTNARKTTYCPGYYRLPGQS
HSYRCWRRGGHGAVALEAALVQSCDVYFYVLAHELGIERLKDYLGAFGFGARTGIDVAGE
LSGLVPSREWKEQVRKQLWYPGETLIVGIGQGAFLATPLQLAVATATLANRGHFLAPRVA
RAAQVPGAPRAQELPVFSRTIAAGDATQWDQIIHAMTQVVESPRGTAKGIRSRDYRIAGK
TGTAQVFTLGKNQTYNAARLTETMRDHALFVAFAPADDPRIAVAVIVENGGHGGTVAAPV
ARKVMDAWLGGSTLITDPGVVDGD
NT seq 1875 nt NT seq  +upstreamnt  +downstreamnt
atgcgcctggactcccatctggcggatcggcagcgcgagtggcggctggtgggggcgcgt
gccatcgttgccgcggtcctggtcctggcggccctgtcattggtcgtggtgcggctcgcg
cgcctgcagatcgccgaccacgagcacttctccgtgctgtcccaggaaaatcgggtgaag
gtccagccggtcccgcccagccgcggtctcatctatgacaccaagggtgtggtcctggcc
gacaatcacccctccttttcgctggagattaccgtcgagaaggtcgagaacctgtccgcg
acgatcgatgcgctggcggccatcatccgcgtcgatgacaaggaccgggagcgtttcagg
cgcctcaagggtcagcgggtgcgcttccagggcgtgcccctgcggctgaatctgaccccg
gaggaggtggcccgcttttcgctcgacagctatcgcttccccggcgtggacgtgcgcgcc
gagctgatccgcagctatccgcacggggaactcaccgcccatgtcctgggctatgtgggg
cgcatcaaccgggaggagatggaccatatcgacaccagtgcctatgccggcacccacttc
atcggcaagggcggggtggagaagtaccatgaggggctcctgcatggacaggccggttac
cagcaggtggaggtgaacgcgcgcggccgggtgctgcgcacgctcgagggcaagtccccg
gtcgccgggcaggacctgcacctgtttctggacatcgccctgcagcgcgcggccaccgag
gccctgggtgacaaccgcggtgcggtggtggccatcgacccgcgcaccggcggcgtgctg
gccctggtgagcaagcccagtttcgaccccaacccctttgtcgagggcatcggcagtgcc
gactatcacgccctgctctactccccggacaagccgctgtacaaccgggcggtgcgtggt
cagtatcccccggggtccacggtcaagcccttcgtcggattcgccgggctcgccgcgggg
gtgaccaatgcgcgcaagaccacctattgccctggctactaccggctgcccggtcagagt
cacagctatcgctgctggcggcgcggcgggcacggggcggtggcgctggaggccgcgctg
gtgcagtcgtgcgacgtctatttctatgttctcgcccacgaactggggatcgagcgcctc
aaggattacctgggcgcgttcggattcggtgcccgcaccggcatcgacgtggccggcgag
ttgagcgggctggtgccctcgcgggagtggaaggaacaggtgcgcaagcagctctggtac
cccggcgagaccctgatcgtcggcatcggtcagggcgcctttctggccaccccgctgcaa
ctggccgtggccaccgccaccctggccaatcgcggtcacttccttgcgccccgcgtggcc
cgcgccgcccaggtgccgggcgcgccgcgggcccaggagttgccggtcttctcccgcacc
atcgcggcgggcgacgcgacccagtgggaccagatcatccacgccatgacccaggtggtg
gagagcccccgcggaacggccaaggggatccgcagccgcgattaccggatcgccggcaag
accgggaccgcccaggtcttcaccctgggcaagaaccagacctacaacgccgcccggctc
accgagacgatgcgcgaccatgcgctgttcgtcgcctttgccccggcggacgacccgcgg
atcgcggtggcggtgatcgtcgagaacggcggacacgggggcacggtggcggcgccggtg
gcgcgcaaggtcatggatgcctggctcggcggttcgaccctgatcaccgatccgggggtg
gtcgatggcgactag

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