Candidatus Thiodictyon syntrophicum: THSYN_26425
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Entry
THSYN_26425 CDS
T05211
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent helicase HrpB [EC:
5.6.2.6
]
Organism
tsy
Candidatus Thiodictyon syntrophicum
Brite
KEGG Orthology (KO) [BR:
tsy00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
THSYN_26425
Enzymes [BR:
tsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
THSYN_26425
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GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
AAA_19
AAA_22
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
AUB84123
UniProt:
A0A2K8UEW9
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All DBs
Position
6195275..6197809
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AA seq
844 aa
AA seq
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MSPSDLGAPLPVDGALPLLATALAQGHAVLTAPPGSGKTTRVPLLLRDAPWLAGGTILML
EPRRPAARMAAARMADLLGETVGETVGYQVRFERRIGAGTRIQVLTEGILTRRLQSDPEL
AGVGLLIFDEFHERSLQADLGLALALDLAAALRPDLRLLVMSATLEADAVARLLGAAPVI
SAAGRSFPVAVRYLEVPPRDPLAAMEQTVREALRDQPGDLLAFLPGAGEIERVRARLAGT
LDEGIAVLPLHGSLTVAEQQRALVPGPGSGRRVVLATDIAETSVTIEGVTTVIDGGLARK
PRFHAGSGLTRLVTEPIPLASAEQRAGRAGRLGPGVCYRLWTRAQEVGRAPHRRAEILDA
DLAPLALDLALWGLRDPAALCWLDPPPAPAWLQAVDLLRDLGALDPSGAITPRGRRLAEL
PLHPRLGRMLCAARPGREARRAADLAALLAERDGWTGAPGAGRPADLGLRLGALAAFREG
RAGRDMERGRLITADRLSRRLVPDPERAGRAAATDTDPAPLEAGALLALAYPDRVCQRRG
AAGSRYLLAGGTGAELPRDDALAVHPYLVAAELDARGPDARIQLALPISEAELRGTLAER
IQTTEALAWDATRESVTARRESRLGALVLDSQPLPTADPGRTLALLLEQVARQFERALPW
DPAARQFQARVGLLRTHDPAGGWPDLGDARLCADLDDWLAPWLQGKRSLADVRALRLAEI
LVGMLDWGQRARLDTLAPETLTTPAGNRRRLDYLAGPEPVLPVPVQELFGTRETPSLCAG
RVPVMLHLLSPAGRPVQITRDLAGFWARGYPEVRKELRGRYPKHAWPDDPCSAVPVTRVR
PQRG
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
ctgagcccgagcgacctcggggcgccgctgccggtcgacggcgccctgccgctactggcg
accgccttggcccaaggccacgcggtcctcaccgccccgcccggctccggcaagaccacg
agggtcccgctgctgctgcgcgacgccccttggcttgcgggcggcaccatcctcatgctg
gaaccgcggcgcccggccgcccgcatggccgccgcccgcatggccgacctgctgggcgaa
accgtcggggaaacggtcggctaccaggtccgcttcgagcggcggatcggggccggcacc
cgcatccaggtcctgaccgagggcatcctcacccgtcggctccagtccgatcccgaactc
gcaggcgtcgggctcctgatcttcgacgaattccacgaacggagcctccaggcggacctg
gggctcgcgctggcgctcgacctggccgcggccctgcgcccggatctccgtctcctcgtc
atgtccgccaccctggaggcggacgccgtcgcccgcctgctgggcgcggccccggtcatc
agcgccgcagggcgcagcttcccggtggcggtacgctatctggaggtcccgccgcgcgac
ccgctggccgccatggaacagacggtccgcgaggcgctgcgcgaccagcccggcgacctg
ctcgccttcctgcccggcgccggggagatcgagcgggtgcgcgcccgtctggccggcacc
ctggacgaggggatcgcggtgctgccgctgcatggatcgctgacggtggcggaacaacaa
cgcgccctggtccccgggccggggtccggccgccgggtagtgctcgccaccgatatcgcc
gagaccagcgtcaccatcgagggggtgactacggtcatcgacggcgggctcgcgcgcaag
ccccgctttcacgccggctccgggctcacgcgcctggtgaccgagccgatcccgctcgcg
tccgccgagcagcgcgccgggcgcgccgggcggctcggccccggcgtctgctaccggctg
tggacgcgcgcccaggaggtcggccgcgccccgcaccgacgcgccgagatcctggacgcg
gacctggcgcccctggccctggatctggccctgtggggcctgcgcgaccccgccgccctg
tgctggctggacccgccgcccgcccccgcctggctccaggcggtcgacctgctccgcgac
ctgggggcgctggacccctccggggccatcaccccgcgcgggcgccggttggcggaactg
cccctgcacccgcgcctggggcggatgctgtgcgccgcccggcccggccgggaggcacgc
cgcgccgcggatctcgcggccctgctggccgagcgcgacggctggaccggcgcccccggg
gcggggcgcccggcggacctgggcctgcgtctgggcgccctggcggccttccgggagggc
cgtgccgggcgcgacatggaacgtgggcgcctcatcaccgccgaccgactgagccgccgg
ctggtaccggacccggagcgggccgggcgcgcggcggcgacggacaccgacccggccccg
ctggaggccggcgccctgctcgcgctcgcctatcccgaccgggtctgccaacgccggggc
gccgccgggtcgcgctatctgctggccgggggcaccggtgccgaactgccgcgcgacgat
gccctggcggtccacccctacctggtagcggcggaactggacgcccgcggccccgatgcc
cgcatccaactcgccctgccgatcagcgaggccgagttgcgcggcaccctggccgagcgt
atccagaccaccgaggcgctggcctgggacgcgacccgggagagcgtgacggcgcgccgt
gaatcccggctcggcgccctggtccttgactcccagccgctgcccacggcggacccgggg
cggaccctggccctgctcctggaacaggtggcacgccagttcgagcgcgccctgccctgg
gacccggcggcgcgccagttccaggcgcgggtcggtctcctgcgcacccacgaccccgcg
ggcggctggcccgacctcggcgatgcgcgcctgtgcgcagacctggacgactggctcgcg
ccctggctccagggcaaacgcagcctcgcggacgtgcgcgccctgcgcctggccgagatc
ctcgtcgggatgctcgactgggggcagcgcgcgcgccttgacaccctggcccccgagacc
ctcaccacccccgccggcaaccggcggcggctcgactacctggcgggtccggaaccggtg
ctgccggtcccggtccaggaactgttcggcacccgggagacccccagcctgtgcgctggc
cgggtcccggtgatgctgcacctgctctcgcccgccggccgcccggtccagatcacccgc
gatctggccggcttctgggcgcgcggctacccggaggtccgcaaggagttgcgcggtcgc
taccccaaacacgcctggccggacgacccgtgcagcgccgtgccggtcaccagggtccgt
ccgcagcggggctga
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