KEGG   Thiohalobacter thiocyanaticus: FOKN1_2440
Entry
FOKN1_2440        CDS       T05229                                 
Name
(GenBank) ATP-dependent exonuclease V beta subunit
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
ttc  Thiohalobacter thiocyanaticus
Brite
KEGG Orthology (KO) [BR:ttc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ttc03400]
    FOKN1_2440
Enzymes [BR:ttc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FOKN1_2440
DNA repair and recombination proteins [BR:ttc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     FOKN1_2440
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 AAA_30 DEAD
Other DBs
NCBI-ProteinID: BAZ94812
UniProt: A0A1Z4VTT4
LinkDB
Position
2585059..2588445
AA seq 1128 aa
MNSPLDATRPAANATVHASAGTGKTWLLVTRLMRLLLAGVEPGRVLAVTFTRKAAAEMLE
RLTERLRLLATVPDADLDPLLEQMGVAPEPELRRQARRLYETLLRADFNLRATTFHSVCQ
EILQRFPLEAGVPPGFELLEAEGDARDAAWDALYAEATAAPEGDIGRALDTLMDGCGGLG
SVQTALGSFLAHRIDWWAYTDGRDDPVAWAGERLREQLDIDPDTDPEQVFFNDLTCQRLQ
QFRDLLLLHPTDTHTRQAAAIDAALNTGTPAPTRIEALWPALLTQKGEPLSRKASKTLEK
KLGADGMERLLGLHTRLCEQFLDLLDARQRRTNWELNRAWYHAGARLLEQFQAIKRNQRQ
LDFSDLEWHAYQLLNRSEQAHWVQYKLDNRIDHLLVDEFQDTNPTQWRLLLPLLEELAAG
SERARSVFLVGDEKQSIYRFRRADSRLLGAASEWLEQHLASRRHSLTHSRRSAAAIIDCV
NRVFAQPELHSRMPHFEPHGTFHPHLWGRVELLPLIQAEAAPEAEPVPAPTGLRDPLRQP
RELPLDDRYYREGRQTAERIQALIAGGCLLEEGDRARPVRYGDILILLRSRTHAADYERA
LRDAGIPCLGTSRGALLDSLEARDLEALLQTLIAPHNNLALAQVLRSPLFAATDADLVRL
AGLKQGDWMARLSALADDPATPEALRRAADCLPRWDERVGRLPVHDLLDRVFFEGDVLAR
YAAATPAALRPQVLANLQRFLELALEIDSGRYPSLPRFLQQLSRLRERSDEAPDDAPPAA
GDRVRMLTIHGAKGLEAPVVLLLDAAAAERDRSAWQALVDWPASDARPRYFLLNPGQARR
DRISRDWQAAQQQAEAREDANLLYVALTRARQLLIVSGTAPARGSGSGWHDLIRTGLAPE
TQALDTPLVLETGVAPAAAANVATPAAAEAPAPDPRLARPLEFALPRDRLAPSRRNETIA
DSEGFDADGRLRGQAVHLLLEWLSAPAPISAGVALQRLAAWAGRDAMQDDLQAWLAEARA
LLAHPGLADLFDPARYEMAWKEVPLQYLDDGVLVEGIVDRLVRRADRLLLIDYKTHRLGT
APAAQHAASFQGQMRYYAAGARRLWPQLPIECGILYTHSRELVLLDID
NT seq 3387 nt   +upstreamnt  +downstreamnt
atgaactcccctctggatgcgacccggccggcggccaacgccaccgtccatgcctcggcc
ggcaccggcaagacctggctgctggtcacccggctgatgcggctgctgctggcgggggtg
gagccgggccgggtcctggcggtgaccttcacccgcaaggccgccgccgagatgctggag
cggctcaccgaacgcctgcgtctgctggccacggtgccggacgcggacctcgatccgctg
ctggaacagatgggcgtggcacctgagccggaactccgccggcaggcccgccggctctat
gagaccctgctgcgcgccgacttcaacctgcgcgccaccaccttccattcggtctgccag
gagatcctgcagcgcttcccgctggaggccggggtcccgccgggcttcgaactgctggag
gccgaaggcgacgcccgcgacgccgcctgggatgccctctatgccgaggccaccgccgcg
cccgagggcgacatcggacgggcactggataccctgatggacggctgcggcggtctgggc
agcgtgcagacggcgctgggcagttttctcgcccaccgcatcgactggtgggcctacacc
gacggccgggacgacccggtcgcctgggccggggagcggctgcgcgaacaactcgatatc
gatccggacaccgatccggaacaggtcttcttcaatgacctgacctgtcagcggctgcag
cagttccgtgacctgctgctgctgcatccgaccgatacccacacccggcaggccgcggcc
atcgatgccgccctgaacaccggcacaccggcaccgacgcgcatcgaggccctgtggccg
gcgctgctgacgcagaaaggcgaaccgctcagccgcaaggccagcaagacgctggaaaag
aaactcggcgctgacggcatggaacggctgctgggactgcatacccggctgtgcgagcag
ttcctcgacctgctcgacgcccgccagcgccgcaccaactgggagctcaatcgcgcctgg
tatcatgccggcgcccggctgctggaacagttccaggccatcaaacgcaaccagcgtcag
ctggatttcagcgacctggaatggcatgcctatcagttattgaaccgcagcgagcaggcg
cactgggtacagtacaagctcgacaatcgcatcgatcacctgctggtcgacgagttccag
gacaccaaccccacccagtggcgcctgctgctgccgctgctggaggaactggccgccggc
agcgagcgggcgcgcagcgtgttcctggtcggtgacgaaaagcagtccatctaccgtttc
cgccgcgccgattcgcgcctgctcggcgcggccagcgaatggctggaacaacatctcgcc
agccgccgccacagcctgacgcactcccggcgttcggccgcggccatcatcgactgcgtg
aaccgggtcttcgcccagcccgaactgcacagccgcatgccgcacttcgaaccgcacggc
acctttcatccccatctgtggggccgggtcgaactgctgcccctgatccaggccgaggcc
gcacctgaagccgaaccggtgccggcacccaccgggttgcgcgatccgctgcgccagccg
cgggaactgccgctggatgatcgctactaccgcgaaggccgccagaccgccgagcgcatc
caggcgctcatcgccggcggctgcctgctggaggaaggcgaccgggcccgccccgtgcgc
tacggcgacatcctgatcctgctgcgcagccgcacccatgccgccgactacgaacgcgcc
ctgcgcgacgccggcatcccctgcctgggcacctcccgcggcgccctgctcgacagcctg
gaggcgcgcgacctggaggcgctgctgcagaccctgatcgcgccgcacaacaacctggcc
ctggcccaggtgctgcgctcgcccctgtttgccgccacggatgccgacctggtccgcctg
gccggactgaagcagggcgactggatggcccggctgagtgcactggccgatgatccggcc
acgccggaagccctgcgccgggccgccgactgcctgccgcgctgggacgaacgggtcgga
cggctgccggtgcatgacctgctggaccgggtcttcttcgagggggacgtgctggcgcgc
tacgccgcggccacgccggcggcgctgcggccgcaggtactggccaacctgcagcgattc
ctggaactggcgctggaaatcgacagcggccgctaccccagcctgccgcgcttcctgcag
cagctgagccgcctgcgcgaacgcagcgacgaggccccggacgacgccccgccggcggcg
ggcgaccgggtgcggatgctcaccatccacggcgccaagggcctggaggcaccggtggta
ctgctgctggatgccgccgcggcggaacgcgaccgcagcgcctggcaggcgctggtggac
tggccggcaagcgacgcgcgcccccgctatttcctgctcaacccgggccaggcgcggcgc
gaccgcatcagccgcgactggcaggcggcccagcagcaggccgaggcgcgcgaggacgcc
aacctgctgtacgtggccctgacccgggcgcggcagctgctgatcgtctccggcaccgcc
ccggcccggggcagcggcagcggctggcacgacctgatccgcaccgggctggcaccggag
acgcaagccctcgacacgccgctggtgctggagaccggcgtggcgccggctgcggcggcg
aatgttgcaacgccggcagcggccgaagcaccggccccggatccgcgcctggcccgaccg
ctggaatttgccctgccgcgcgaccggctggcgccgagccgccgcaacgagaccatcgcc
gacagcgagggtttcgatgccgacggccgcctgcgcggccaggcggtgcacctgttgctg
gagtggctgagcgcgccggccccgatcagcgcaggggtcgccctgcagcggctggccgcc
tgggcgggccgggatgccatgcaggacgacctgcaggcctggctggccgaggcccgcgcc
ctgctcgcccaccccggactggccgacctgttcgacccggcccgctatgaaatggcctgg
aaggaggtgccgctgcagtacctggacgacggcgtcctggtggagggcatcgtcgatcgg
ctggtgcgccgggccgaccggctgctgctcatcgattacaagacccatcggctgggcacc
gcgccggccgcgcagcatgccgcgtccttccagggccagatgcgttactatgccgccggc
gcgcggcgcctgtggccgcaactgcccattgaatgcggtatcctctacacccattcgcgc
gagttggtgctgctggatatcgattga

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