Thiohalobacter thiocyanaticus: FOKN1_2597
Entry
FOKN1_2597 CDS
T05229
Definition
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ttc
Thiohalobacter thiocyanaticus
Pathway
ttc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ttc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FOKN1_2597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttc03400
]
FOKN1_2597
Enzymes [BR:
ttc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FOKN1_2597
DNA repair and recombination proteins [BR:
ttc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FOKN1_2597
SSDB
Motif
Pfam:
UDG
Other DBs
NCBI-ProteinID:
BAZ94967
UniProt:
A0A1Z4VTK5
LinkDB
Position
complement(2749776..2750495)
AA seq
239 aa
MGIEAWVRRVPPAAESPAIAPEPVVEATPGPEPEPAAATAAADNDAVATLGWEALRERVL
GCTACALHTSRTQAVFGVGNPEADWLIVGEAPGAEEDRRGEPFVGRAGQLLDAILRAAGQ
DRTSAYIANILKCRPPNNRDPEPEEIGCCQDYLARQIALIRPRLILAVGRIAAQHLLATD
QPIGRLRGRVHRWGEAGIPLVVTYHPAYLLRSPGEKRKVWEDLQLAMQSIREPAEAARQ
NT seq
720 nt
+upstream
nt +downstream
nt
atgggcatcgaggcctgggtgcggcgggtgccgccggcggccgaatcgccggcgatcgcg
ccggagccggttgtcgaggcaacgccgggccctgaaccggaaccggcagccgcaaccgca
gctgccgataatgatgcagtggcgacgctgggctgggaggcgctgcgcgagcgggtgctg
ggctgtaccgcctgcgcgcttcacaccagccgcacccaggcggtgttcggggtgggcaac
ccggaggccgactggctgatcgtgggcgaggcgcccggcgccgaggaggaccggcgcggc
gagcccttcgtcggccgtgccgggcagttgctcgatgccatcctccgggccgccggtcag
gaccgcacaagcgcctatatcgccaatatcctgaaatgccggccgcccaataaccgcgac
ccggagccggaggagatcggctgctgccaggactatctggcccgccagattgcgctgatc
cggccgcgcctgatcctggccgtgggccgcatcgccgcccagcacctgctggccacggac
cagcccatcggtcggctgcgtgggcgggtgcatcgctggggcgaggccggtatcccgctg
gtggtgacctaccaccccgcctatctgctgcgctcgcccggcgagaagcgcaaggtctgg
gaggatctgcagctggccatgcagagtatccgcgagccggcggaggcggcgcggcagtga
DBGET
integrated database retrieval system
