Thermococcus thioreducens: A3L14_01035
Help
Entry
A3L14_01035 CDS
T05104
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ttd
Thermococcus thioreducens
Brite
KEGG Orthology (KO) [BR:
ttd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ttd03016
]
A3L14_01035
Enzymes [BR:
ttd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
A3L14_01035
Transfer RNA biogenesis [BR:
ttd03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
A3L14_01035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
AKAP7_NLS
2_5_RNA_ligase2
DUF1045
STAS
DUF6304
Motif
Other DBs
NCBI-ProteinID:
ASJ11559
UniProt:
A0A1I0NSH8
LinkDB
All DBs
Position
complement(216488..217042)
Genome browser
AA seq
184 aa
AA seq
DB search
MRAFIAIEVSDSVRDNLLKAQERIGSKSAKIKFVERENFHLTLKFLGEIDKATAEEVKKA
LAEIAKKHKKHRVRVKGIGVFPNPNYVRVIWAGIENDEDIKAIAADVEKEMRRLGFKKDK
DFVAHITIGRVKFVRDKVELAMALKDLANEDFGEFDVEAIELKKSTLTPKGPIYETVARF
ELAG
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgagggcgttcatagccatcgaggttagcgatagcgttagggacaacctccttaaggcc
caggagagaatagggagcaagtcagcaaagataaagttcgtcgagcgcgagaacttccac
ctaacgctcaagttcctgggggagattgacaaggcaacggcagaagaggtcaagaaggct
ttagcagagatagctaaaaaacataagaagcaccgcgttcgcgttaagggtataggcgtc
ttcccgaacccgaactacgtccgcgtaatctgggcaggaatagagaacgacgaggacata
aaggcgatagcggccgatgtggagaaggagatgcgccgcctgggcttcaaaaaggacaag
gacttcgtggcgcacataaccataggcagggtgaagttcgtgcgcgataaggttgagctg
gcgatggcgctcaaagaccttgccaatgaagacttcggcgagttcgatgtcgaggccata
gagctgaagaagagcacgctgactccaaagggcccaatctatgagaccgttgcgaggttc
gagctggccgggtga
DBGET
integrated database retrieval system