KEGG   Thermococcus thioreducens: A3L14_01035
Entry
A3L14_01035       CDS       T05104                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
ttd  Thermococcus thioreducens
Brite
KEGG Orthology (KO) [BR:ttd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ttd03016]
    A3L14_01035
Enzymes [BR:ttd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     A3L14_01035
Transfer RNA biogenesis [BR:ttd03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    A3L14_01035
SSDB
Motif
Pfam: LigT_PEase AKAP7_NLS 2_5_RNA_ligase2 DUF1045 STAS DUF6304
Other DBs
NCBI-ProteinID: ASJ11559
UniProt: A0A1I0NSH8
LinkDB
Position
complement(216488..217042)
AA seq 184 aa
MRAFIAIEVSDSVRDNLLKAQERIGSKSAKIKFVERENFHLTLKFLGEIDKATAEEVKKA
LAEIAKKHKKHRVRVKGIGVFPNPNYVRVIWAGIENDEDIKAIAADVEKEMRRLGFKKDK
DFVAHITIGRVKFVRDKVELAMALKDLANEDFGEFDVEAIELKKSTLTPKGPIYETVARF
ELAG
NT seq 555 nt   +upstreamnt  +downstreamnt
atgagggcgttcatagccatcgaggttagcgatagcgttagggacaacctccttaaggcc
caggagagaatagggagcaagtcagcaaagataaagttcgtcgagcgcgagaacttccac
ctaacgctcaagttcctgggggagattgacaaggcaacggcagaagaggtcaagaaggct
ttagcagagatagctaaaaaacataagaagcaccgcgttcgcgttaagggtataggcgtc
ttcccgaacccgaactacgtccgcgtaatctgggcaggaatagagaacgacgaggacata
aaggcgatagcggccgatgtggagaaggagatgcgccgcctgggcttcaaaaaggacaag
gacttcgtggcgcacataaccataggcagggtgaagttcgtgcgcgataaggttgagctg
gcgatggcgctcaaagaccttgccaatgaagacttcggcgagttcgatgtcgaggccata
gagctgaagaagagcacgctgactccaaagggcccaatctatgagaccgttgcgaggttc
gagctggccgggtga

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