Thioalkalivibrio paradoxus: THITH_03655
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Entry
THITH_03655 CDS
T03590
Name
(GenBank) DNA polymerase III
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tti
Thioalkalivibrio paradoxus
Pathway
tti03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
THITH_03655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tti03400
]
THITH_03655
Enzymes [BR:
tti01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
THITH_03655
DNA repair and recombination proteins [BR:
tti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
THITH_03655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHE97511
UniProt:
W0DGL0
LinkDB
All DBs
Position
768546..769358
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AA seq
270 aa
AA seq
DB search
MPLSRRQREVLQELGIPVWVPRERPDPPATLAGTDAVEGRSNAMPGPAPEQPEIPVPDIG
DEPAPRADDTPAPPSPSAETLPPVAQLEWEALRARVAACEACAELAARRTQTVFGVGDPD
ADWLFIGEAPGAEEDRRGEPFVGRAGLLLDNMLAALGLSRGENVYIANILKCRPPGNRDP
KAEEAAACRGYLDRQIELIRPRVIVAVGRVPAQALLATDAPLGRLRGRELEYGGVPLVVT
YHPAYLLRSPTEKAKAWQDLLRARACLAAD
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgagtcggcgacagcgcgaggttctgcaggagctggggatacccgtctgggtg
ccgcgcgagcgcccggacccgccggcaacgctcgccggcaccgacgctgtggagggccgt
agcaacgcaatgccggggccagcgccggagcagccggaaatacccgtgccagacatcggg
gacgaacccgcgccgcgtgccgacgataccccggcgccaccgtccccttcggccgaaacc
ctgccgcccgtggcacaactcgagtgggaggccctgcgcgcgcgggtcgcggcctgcgag
gcctgtgccgaactggcggcgcgacgcacgcagaccgtattcggcgtcggcgaccccgac
gccgactggctgttcatcggcgaggcgcccggggccgaggaggatcgtcgcggggagccg
ttcgtggggcgcgcggggctgctgctcgacaacatgctggcggcgctggggctgagccgg
ggcgagaatgtctatatcgccaacatcctgaagtgccgcccgccggggaaccgcgatccc
aaggccgaggaggccgccgcctgccggggatacctggaccggcagatcgaactgatccgt
ccacgggtgatcgtcgccgtcggccgggtgccggcgcaggcattgctggcgaccgacgct
ccactgggccggctccggggccgcgaactcgagtacggcggtgtgccgctggtggtgacc
tatcaccctgcctacctgctgcgttcgccgaccgagaaggccaaggcctggcaggatctg
ctgcgtgcccgcgcatgtctggctgcggactga
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