Thermosulfidibacter takaii: TST_0450
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Entry
TST_0450 CDS
T04192
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ttk
Thermosulfidibacter takaii
Pathway
ttk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TST_0450 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttk03019
]
TST_0450 (pnp)
03016 Transfer RNA biogenesis [BR:
ttk03016
]
TST_0450 (pnp)
Enzymes [BR:
ttk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
TST_0450 (pnp)
Messenger RNA biogenesis [BR:
ttk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TST_0450 (pnp)
Transfer RNA biogenesis [BR:
ttk03016
]
Prokaryotic type
tRNA degradation factors
TST_0450 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_2
Spt6_S1
2H-phosphodiest
Nrf1_DNA-bind
Motif
Other DBs
NCBI-ProteinID:
BAT71258
UniProt:
A0A0S3QSE6
LinkDB
All DBs
Position
complement(460307..462511)
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AA seq
734 aa
AA seq
DB search
MGEVAVECEIGKDKKIIIETGKVAKQANGSVIVRSGNSMVLVTACCAEEPSEGLDFFPLT
VEYRERAYAAGKIPGGFIKREGKPMDNEILVSRLIDRPIRPLFPDGFRHEVQVMALVISA
DENHPPDVLAINGASAALCISDIPFEGPIGAVRIGLINDEFIINPTQDEIEESKLNMVVA
GTENAIVMVEAGANEVPEATVIEALKVAHEEIKKIASIQKELTAQVGKEKIVFEPPPSTE
EYEKHIENKHLEALLAAIKVQGKKPREKALKELKKSILEEFSEEEQPLVSMAFDNVEKKH
MRRMILEEGIRADGRGLKDIRPITCEVGILPEAHGSALFTRGETQALVAATLGMPGEDEQ
ILDELFGEGSKSFMVHYNFPPFSVGEVRPLRGPSRREIGHGALAERALKPMVPAKSEEFP
YIVRVVSDILESNGSSSMATVCGGSLALMDAGVPMKKPVAGIAMGLIMDEETGRYAILSD
ILGMEDHLGDMDFKVAGTDEGITALQMDIKISGITWDIMAEALEQAREGRLYILEKMKET
LPTPRPEISPKAPRIYCMHIKPDFIRDVIGPGGRTIRAIIDKTGARIFIDEDGLVTVSAE
TPEAAKEAMDIISKIAHEYQVGELVRGKVKRIEDYGLFVEVAPGKEGLLHISQISDRRIR
DLKEEFHIGDEVEAKIMEIDELGRFRLTRRGLEGGPKEEPEDNERPSRPPRRPSPRNKDT
RHRDERGKNRGERR
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgggggaagtagcggtagagtgcgaaattggtaaggataagaaaataattattgaaact
ggcaaagtagcaaaacaagccaacggttctgtaatagttagatccggcaactcgatggtt
cttgtgaccgcctgttgtgccgaggagccatcagaaggactagacttctttcctctcaca
gtagagtatagagaaagggcctatgcagccgggaagatcccagggggattcatcaaaaga
gaaggaaagcctatggataacgaaatactggtatcaaggctcatagacagacccatcaga
cctctctttcccgacggcttcagacacgaggttcaggtgatggccctggttatctcggca
gatgagaaccatccacccgatgtacttgctataaatggagcatcggccgccctttgtata
tcggacatcccctttgaaggacccattggagctgtaaggataggccttataaatgatgaa
ttcatcataaatccgacccaggacgaaatagaagaatccaagctaaacatggtagtggcc
ggtacagaaaacgctattgtaatggtagaagcaggagctaatgaagtaccggaagccacg
gttatcgaagcgttaaaagttgcccatgaagagatcaagaaaattgcgagcatccaaaag
gaacttacagcccaggtaggaaaggaaaagatagttttcgagcctccaccttccactgaa
gaatacgagaaacacatagaaaataagcatctagaagcgcttttagctgccataaaggtt
cagggtaaaaaacccagagaaaaagcacttaaagaactgaaaaagagcatcttggaggag
ttctctgaggaagagcaacctcttgtctccatggcctttgacaatgtggaaaagaagcat
atgagaaggatgattctggaagaaggcatcagagccgatggcagaggactcaaggacata
aggcccatcacctgcgaggtaggcattttaccagaagcccatggatcggccctctttaca
aggggtgaaacccaggccttagttgcagcaaccttgggaatgcctggcgaggatgaacaa
attctggatgaactttttggagaaggatccaagagctttatggtgcattataactttcct
cccttctcagtgggagaggtacgtcctttaagagggccttccagaagagagataggtcat
ggagctttggcggaaagggcacttaagcccatggttcctgccaaaagtgaagaatttcca
tatatagtaagagtggtttctgatatactggagtctaacggttcctcatcaatggccacg
gtttgtggaggatctctcgctctaatggatgctggggtacccatgaaaaagcccgtagcc
ggtatagccatgggtctgataatggacgaggaaactggtagatatgccatactatcagac
atacttggcatggaagatcaccttggagacatggacttcaaggtagcaggaactgatgaa
gggattacagcgttgcagatggacattaaaatctcgggtataacctgggatattatggcg
gaagccctggaacaggcaagggagggaaggctgtatatcttagaaaagatgaaagagacg
cttcccacaccgaggcctgaaatctctcccaaagccccaagaatctattgcatgcatata
aagccagactttatcagggatgttatagggcccggaggaagaaccatcagagccataata
gacaagacaggagccaggatattcatagatgaagatggcctagtaacagtctctgcagag
acccctgaagctgcaaaggaagctatggatataatatcgaagatcgctcacgaataccaa
gttggagaactggttagaggcaaagtaaaaagaatagaggattacggtctctttgttgag
gttgctccagggaaggaaggactgctacacatttcccagatatcggatcgcaggataaga
gatcttaaagaggagttccacattggtgatgaagtggaagccaagatcatggagattgac
gaattaggtcgcttccgcctcacaaggagaggacttgagggaggccctaaggaagaacca
gaggataacgaaaggccgtcaagacctccaagaagaccatcccccagaaacaaagataca
agacatagagatgaaagaggcaaaaacaggggagagcggcgttaa
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