Thermus thermophilus SG0.5JP17-16: Ththe16_1149
Help
Entry
Ththe16_1149 CDS
T01867
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tts
Thermus thermophilus SG0.5JP17-16
Pathway
tts03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tts00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ththe16_1149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tts03019
]
Ththe16_1149
03016 Transfer RNA biogenesis [BR:
tts03016
]
Ththe16_1149
Enzymes [BR:
tts01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Ththe16_1149
Messenger RNA biogenesis [BR:
tts03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Ththe16_1149
Transfer RNA biogenesis [BR:
tts03016
]
Prokaryotic type
tRNA degradation factors
Ththe16_1149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_2
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AEG33558
UniProt:
F6DH67
LinkDB
All DBs
Position
1101699..1103840
Genome browser
AA seq
713 aa
AA seq
DB search
MEGTPNVPQAHRYELTLAGRPLVLETGKYAKQASGSVLVRYADTVVLATAQASETPVEAD
FLPLTVEFEERHYAVGKIPGSFMRREGRPGEKAILSARMTDRPIRPLFPKGFRHEVQIIV
TVLSADQKNPPDILGPIAASAALMLSDIPWEGPIAAVRVGLIGGSFVLNPTLQELEESQL
DLVVAGSKEAILMVEAEAGEVDEETLVQALEFAHKEMQPILELQEAMARELAKPKMAWTP
PESLPEEEKEALYRLALERGLSQVLQTASKGERSRALSEFAERLIAEALPKGEDGTPDEG
KKPLYESAFDEVVRRELRRLVLEEGKRADGRGPKDLRPIWIEVDVLPRAHGSAVFTRGET
QVLGTVTLGTGRDEQILDDLGIDETEKFLVHYNFPPFSTGEVRRLRGVSRREVGHGNLAK
RALKAVMPKEEDFPYTIRVVGDVLESNGSSSMATVCAGCLALMDAGVPIRAPVAGVAMGL
VWEENRAVILTDILGLEDALGDMDFKVAGTRKGVTALQMDNKVGGLPREVLKEALLQARE
ARLKILDLMETVLPAPRPELKPFAPRILSLKVPVEKIGLVIGPGGKNVRALEELGVEVDI
EEDGTVRIYSSDLQAALEAKKRIEDLTREAKVGEIYEGTVTRITPFGAFISLFPGTEGLL
HISQIAPGRVERVEDHLKVGDVIKVKVHRIDERGKIDLIRPELEGKIPPRRRK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtacacccaacgtcccccaagctcaccgctacgagctcaccctggcggggcgg
cccctcgtcctggagacgggcaagtacgccaagcaggcctcggggtccgtcctggttcgc
tacgccgacaccgtggtcctggccacggcccaagcctcggagacgccggtggaggccgac
ttcctccccctcacggtggagtttgaggaaaggcactacgccgtggggaagatcccggga
agcttcatgcgccgggaggggcgtcctggggagaaggccatcctctccgcccgcatgacg
gaccgccccatccggcccctcttccccaaggggttccgccacgaggtccagatcatcgtc
accgtcctctccgccgaccagaagaacccgccggacatcctgggccccatcgcggcgagc
gccgccctcatgctctcggacatcccctgggagggccccatcgccgccgtgcgggtgggc
ctcatcggcgggagcttcgtcctgaaccccaccctgcaggagctggaggaaagccagctg
gacctggtggtggcggggagcaaagaggccatcctcatggtggaggcggaggccggggag
gtggacgaggaaaccctggtccaggccctggagttcgcccacaaggagatgcaacccatc
ctggagctccaggaggccatggcccgggaactcgccaaacccaagatggcctggaccccc
ccggaaagcctccccgaggaggagaaggaggccctctaccgcctggccctggagcggggg
ctttcccaggtcctgcagacggcgagcaagggggaaaggagccgggccctttcggagttc
gccgaacgcctcatcgccgaggccctccccaagggggaggacggcaccccggacgagggc
aagaagcccctctacgagagcgcctttgacgaggtggtgcgcagggagcttaggaggctc
gtcctcgaggagggcaagcgggcggacggccgcgggcccaaggacctcaggcccatctgg
attgaggtggacgtcctgccccgggcccacggctccgccgtcttcacccggggcgaaacc
caggtcctgggcaccgtcaccctgggcacgggccgggacgagcagatcctggacgacctg
ggcatagacgagaccgagaagttcctcgtccactacaacttcccccccttctccaccggg
gaggtacggcggctaaggggggtttcccgccgcgaggtggggcacggaaatttggccaag
cgggccctcaaggcggtgatgcccaaggaggaggacttcccctacaccatccgcgtggtg
ggggacgtcctggagtccaacggcagtagctccatggccacggtctgcgccggctgcctc
gccctcatggacgcgggcgtgcccatccgggccccggtggccggggtggccatgggcttg
gtgtgggaggaaaaccgggcggtgatcctcacggacatcctgggcctcgaggacgccctc
ggcgacatggacttcaaggtggccgggacccgcaagggggtcaccgccttgcagatggac
aacaaggtggggggccttccccgcgaggtcctgaaggaggccctcctccaggcccgggag
gccaggctcaagatcctggacctgatggagaccgtcctccccgccccccggcccgagctc
aaacctttcgccccccggatcctctccctcaaggtccccgtggagaagatcgggctcgtc
atcgggcccgggggcaagaacgtgcgcgccctggaggagcttggggtggaggtggacatt
gaggaggacgggacggtccgcatctactccagcgacctccaggccgccctcgaggcgaag
aagcgcatagaggacctcacccgcgaggccaaggtgggcgagatctacgagggcaccgtc
acccgcatcacccccttcggcgccttcatcagcctcttccccggcaccgaggggcttctc
cacatcagccagatcgccccgggccgcgtggagcgggtggaggaccacctcaaggtgggg
gacgtgatcaaggtcaaggtccaccgcattgacgagcggggcaagattgacctgatccgc
cccgagctggaaggcaagatcccccccaggcggcgcaagtag
DBGET
integrated database retrieval system
