Tenuifilum thalassicum: FHG85_11065
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Entry
FHG85_11065 CDS
T06728
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ttz
Tenuifilum thalassicum
Brite
KEGG Orthology (KO) [BR:
ttz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttz03021
]
FHG85_11065
Transcription machinery [BR:
ttz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FHG85_11065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_16
UPF0122
HTH_24
HTH_40
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
QKG80780
UniProt:
A0A7D4BCD9
LinkDB
All DBs
Position
2671093..2671707
Genome browser
AA seq
204 aa
AA seq
DB search
MEMIPDNLSEKAKYDLVLVERALKGDQKAFAELMDRYRDAIYFMLLKMVNNKSDAEDLTL
EAFGKAFKNIHQYTPNYAFSTWLFKIASNNCIDFIRKRKANHISIDQGTEDEEGNSLSPS
SVIASNILDPEEKLIKKQNIKLVQDVVAKLKPRYRKLVELRYFKEYSYEEIAEELNLPLG
TVKAQLFRARELLSNILNNLPPHH
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgattccggacaatctatcggaaaaggcgaaatatgaccttgttttagttgag
cgtgcccttaaaggcgatcagaaagcatttgccgaactgatggaccgctatcgggatgcc
atttatttcatgcttcttaaaatggtaaacaacaaaagcgacgcagaagatttaacactt
gaagcatttgggaaagcattcaagaacattcatcaatacacacccaactatgcatttagt
acatggctctttaaaatagcgtcgaataactgtatcgatttcattcgcaaaagaaaagcg
aatcacatatctattgaccaaggaactgaggacgaggaagggaactctctttctccttca
tcagttattgcctcgaacattttagacccagaagaaaaactgataaaaaaacagaacatc
aagttagtgcaagatgtggttgcaaagctaaagccacgctatcgtaagctagtggagctc
cgatacttcaaagaatactcttacgaagaaattgctgaggaactcaaccttccgcttggc
actgttaaagcccagctattcagagcgagagagttgctttcaaatattctcaacaactta
ccaccccatcattaa
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