Tumebacillus avium: CBW65_17175
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Entry
CBW65_17175 CDS
T04874
Symbol
polC
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
tum
Tumebacillus avium
Pathway
tum03030
DNA replication
tum03430
Mismatch repair
tum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CBW65_17175 (polC)
03430 Mismatch repair
CBW65_17175 (polC)
03440 Homologous recombination
CBW65_17175 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tum03032
]
CBW65_17175 (polC)
03400 DNA repair and recombination proteins [BR:
tum03400
]
CBW65_17175 (polC)
Enzymes [BR:
tum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CBW65_17175 (polC)
DNA replication proteins [BR:
tum03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CBW65_17175 (polC)
DNA repair and recombination proteins [BR:
tum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CBW65_17175 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
HHH_3
DEDDh_C
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ARU62500
UniProt:
A0A1Y0IQD5
LinkDB
All DBs
Position
3512140..3516498
Genome browser
AA seq
1452 aa
AA seq
DB search
MSLVDMNGQSLSFFCERLGIKEEAVIEELARGQFAGRAVVNKKDRSVSAKITLPSRIPVA
AYARVQGAFQAYFAGVAKQANLRFEYANEETDVLERVRDYWALAVDQVLGEDLSLKGELK
EAARLLLDERSIRVPVTSDVIVSRVKQKQYDERLANWLKDHLSLPLIVQLYTDESKRTEA
FENFRSLVEEQDRIEGQKAAVAAEEEKRQEAMKGGKDGAPPEKVELGHPIDDEPTSLKEI
QDEMRRVTVLGRIFSVETRELASGRTLFTFNITDNTDSISCKTFSKGDKQLDVLKLLKDG
MYMKVRGTVQFDTFAKELVLMVQDLSEQHKPTRKDTREKKRVELHLHTPMSSLDGVAPVK
DLYCQAAKWGHTAIAVTDHGVVQSFPEAYSVAKKNNMKCLLGLEAYVVDDGASIVFQLKD
GTDVTIDTNTEWVVFDTETTGLNAAENTLIEIAAVKMKGLEIIEEWTELIDPEVPISAKI
TELTRITNDMVKGKRKLHEVLPDFRAFVGDGVLVAHNAEFDLGFLKASAKRIGMEPWRNV
VLDTLSLARKIYPHEKNYRLGTLAKKFDVDLVNAHRALDDTVALARIYQFMLKDLEEKGY
ATLSQLNQNDGQVDYSRIRPFHATILVQNKTGLKNLYRIVSESHTKHFFRVPRVPRSLLT
KYREGLLVGSACQQGEVFDSILRGKTEEELRGVAEFYDYLEIQPLLHYKPLLRNESISTL
ESVKEYQRMIIRVGKEIGKPVVATGDVHFLNPEDAIYRDVFLQATNDPNRGDQPPLHFMS
TDEMLEAFEYLGPELAEEVVVTNTNLVADMIEDVSPVPDQLYTPKIEGAEDEMRNMCYEK
ARRLYGDELPTIVEERLEKELTSIIKHGFAVIYLISHKIVKKSLDDGYLVGSRGSVGSSF
VATMSDITEVNPLPPHYRCPSCQFSEFIADGSVGSGFDLPDKDCPKCNHVLEKDGHDIPF
ETFLGFKGDKVPDIDLNFSGDYQARAHAYTKVLFGEDYVYRAGTIATVAEKTAFGYVKKY
AEEKGWNLRNAEMARMVQGCTGIKRTTGQHPGGILVVPDYMDVYDFSPIQFPADDKNAEW
KTSHFDFHSIHDNLLKLDILGHDDPTVIRMLQDLTGLDPKKIPTDDPQVMSLFAGTDALT
IDPDNPVTPQKIRSKTGTYGIPEFGTKFVRQMLEDTKPSTFSELLQISGLSHGTDVWLNN
AQSLIQKGVCKLKDVIGCRDDIMVYLIYAGLEPSFAFKIMESVRKGKGLTPEMEEEMKKH
KVPDWYIWSCKQIKYMFPKAHATAYVLMAVRIAYFKVHYPLEFYATYFSVRADDFDLEVM
GKGYDAIVAKIEEIEAKGFQAAPKEKALHTVLEMACEMTARGYKFLPLDLYKSDATKFQV
VKEENGLRPPFGALAGCGESAAKSIAEAAKQGEFLSVQDLQEKSRVSKTVIELLESHGCL
QGMPESNQLSLF
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttgtggatatgaatgggcaaagtctctcttttttttgcgaacgtttggggatt
aaggaagaagcggtgattgaagagcttgcccgcggacaatttgccggccgtgcggtcgtc
aacaaaaaagaccgttccgtctccgcgaaaattacgctgccaagccgcattcccgttgct
gcgtatgcacgggtgcaaggcgcgtttcaagcgtattttgccggtgtggcgaaacaggcg
aacctgcgttttgaatatgcaaacgaagagaccgatgtgctggagcgcgtccgcgattac
tgggcgctggctgtcgatcaggtgctgggcgaggatctttccttaaaaggagagctcaaa
gaagcagcccggctgctgctcgatgagcgctcgatccgcgtgccggtcacttccgacgtc
atcgtcagccgcgtgaagcagaagcaatatgatgagcgtttggcgaactggctgaaagac
cacttgagcctgccgctgatcgtgcagctgtacaccgacgagagcaagcgcaccgaagcg
tttgaaaacttccgctccctggtcgaagagcaagaccgcatcgagggacaaaaagctgcc
gtggcagcagaggaagagaagcgtcaggaagcgatgaaaggcgggaaagacggcgcaccg
ccggagaaagttgaactcggtcatccgatcgacgacgagccgaccagcctgaaggagatt
caggacgagatgcgccgcgtgacggtgctgggacgaatcttctcggtggaaacccgcgaa
ttggcatcgggacgcacgttgttcacgtttaacatcaccgacaacaccgactccatctcc
tgcaagacgttctcgaaaggggacaagcagctcgatgtgctcaagctgctcaaagacggg
atgtacatgaaggtgcgcggcacggtgcagtttgacacctttgccaaggagcttgtgctg
atggtgcaagacctgtccgaacagcacaagccgacccgcaaagacacgcgggagaaaaag
cgcgtcgagctgcatctgcacacgccgatgtcttccctcgacggcgtggcgccggtcaaa
gacctgtactgccaggcggcgaaatggggacatacggcgatcgccgtcaccgaccatggc
gtcgtgcagtccttcccggaagcatacagcgtcgccaagaagaacaacatgaagtgcctg
cttggacttgaagcgtatgtggtcgatgacggagcgtcgatcgtcttccaattaaaagac
ggcaccgatgttacgatcgacaccaacaccgaatgggtcgtgttcgacaccgagaccacc
ggtttgaacgcagccgaaaacacgctgatcgagatcgcggccgtgaagatgaaaggtctg
gagatcatcgaagagtggacagagctgatcgacccggaagtgccgatctcggcgaagatc
accgaactcacccgcatcaccaacgacatggtcaaaggcaaacgcaagctgcacgaagtt
ctgcccgacttccgcgcatttgtcggcgacggcgtgctggtcgcgcataacgcggagttt
gacctcggcttcctgaaagcgagcgccaagcgcatcggcatggagccgtggcgcaatgtc
gtgctcgacacgctgtcgctcgcccgcaagatctacccgcatgaaaagaactaccgcctc
ggcaccttggcgaaaaagttcgatgtcgatctggtcaacgcccaccgcgcgctcgacgat
acggtggcgctggcgagaatctaccagttcatgctgaaagacttggaggagaaaggctat
gcgacgttgtcgcagctgaatcagaacgacggtcaggtcgactacagccgcatccggccg
ttccatgccacgatcctcgtgcaaaacaagaccggtctgaagaacttgtacaggatcgtc
tccgaatcgcacacgaaacatttcttccgcgtgccgcgcgtgccgcgcagcctgctcacc
aaataccgcgaaggcttgctggtcggctcggcctgccagcaaggggaagtgttcgattcg
atcctgcgcgggaagacggaagaagagctgcgcggtgtggcggagttctacgattatctg
gaaatccagccgcttctgcactacaagccgcttttgcgcaacgaatcgatctccacgctg
gaatcggtcaaagaataccagcgcatgatcatccgcgtcggcaaagagatcggcaagccg
gtggtggcgacaggcgatgtccacttcctcaacccggaagatgcgatctaccgcgacgtg
ttcctacaggcgaccaacgatcccaaccgcggggatcagccgccgctgcacttcatgagc
accgatgagatgctggaagcgtttgagtatctcggtccggaactggcagaagaagtggtc
gtcaccaacaccaacctcgtcgccgacatgatcgaagacgtgtcgccggtgcccgaccag
ctctacacgccgaagatcgaaggcgccgaagacgagatgcgcaacatgtgttacgaaaaa
gcgcgccgtctctacggcgatgagctcccgacgatcgtcgaagagcgtctggaaaaagag
ttgacgtcgatcatcaaacacggatttgccgtcatttatctcatctctcataagatcgtc
aagaagtcgctcgacgacggctatctcgttggttcgcgcggttctgtcggctcgtcgttt
gttgcgacgatgtctgacatcaccgaggtcaacccgctgccgccgcattaccgctgcccg
tcttgccagttcagcgaatttatcgccgacggttctgtcggttccggatttgacttgccg
gacaaagactgcccgaagtgcaatcatgtgctggagaaagacggtcatgacattccgttc
gaaacgttccttggatttaaaggggacaaggttcctgatatcgatttgaacttctccggg
gattaccaggcgcgggcgcatgcctacaccaaggtgctgttcggggaggattacgtgtac
cgtgccgggacgattgcaaccgtcgcggaaaagacggcatttggctacgtgaagaaatat
gcggaggaaaagggctggaacctgcgcaacgccgagatggcgcggatggtgcagggctgt
accggcatcaagcgcacgaccggccagcatccgggcggcattctcgtcgtgccggactac
atggacgtgtatgatttcagcccgattcagttcccggccgatgataaaaacgcggagtgg
aaaacgtcgcacttcgacttccattccatccatgacaacctgctcaagctcgatattctg
gggcacgatgacccgactgtcatccgcatgctccaagacttgaccggtctcgatccgaaa
aagatcccgaccgacgacccgcaggtcatgtcgctgtttgccggcaccgatgcgctgacg
atcgacccggacaacccggtcacgccgcagaagatccgttcaaagacgggcacctacggc
atcccggagtttgggacgaagttcgtgcgccagatgctggaagacaccaagccgagcaca
ttctcggagctgttgcagatctccggcctgtcgcacgggacggacgtctggctgaacaac
gcgcagtccctgatccaaaaaggcgtctgcaagctgaaagacgtgatcggctgccgcgac
gacatcatggtctacctgatctatgcaggtctggaaccgtccttcgccttcaaaatcatg
gagagcgtgcggaaagggaaaggcctgacgccggagatggaagaagagatgaagaagcat
aaagtgccggactggtacatctggtcctgcaagcagatcaagtacatgttcccgaaagcg
catgctacggcgtatgtactgatggccgtgcggatcgcttactttaaggttcactatccg
ctggaattttatgcaacttacttctccgtccgcgccgatgacttcgacctcgaagtgatg
ggcaaaggctacgacgcgatcgtggcgaagatcgaagagattgaagcaaaaggcttccag
gccgctccgaaagaaaaagcgctgcacacggtgctggagatggcttgcgagatgacggca
cggggctacaagttcctgccgctcgacctctacaagtcggacgcgacgaagttccaggtc
gtcaaagaagaaaacggcctgcgtccgccgtttggcgcactggccggctgcggcgaatcg
gcagccaagtcgatcgccgaagcggcgaagcagggcgagttcctgtcggtccaggatctg
caggaaaaatcccgcgtttccaaaacggtgatcgaactgctcgaatcgcatggctgcctg
caggggatgccagagagcaaccagctctccctgttttag
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integrated database retrieval system
