Tumebacillus avium: CBW65_17415
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Entry
CBW65_17415 CDS
T04874
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
tum
Tumebacillus avium
Pathway
tum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CBW65_17415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tum03019
]
CBW65_17415
03009 Ribosome biogenesis [BR:
tum03009
]
CBW65_17415
Enzymes [BR:
tum01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
CBW65_17415
Messenger RNA biogenesis [BR:
tum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CBW65_17415
Ribosome biogenesis [BR:
tum03009
]
Prokaryotic type
rRNA helicases
CBW65_17415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
ARU62542
UniProt:
A0A1Y0IPM8
LinkDB
All DBs
Position
3560094..3561674
Genome browser
AA seq
526 aa
AA seq
DB search
MTTFLELNLGKKIQQAISDMGFEEPSPIQAQCIPVVLTGSDVIGQAQTGTGKTAAFGIPL
LEMAGPAKHVQALILTPTRELAIQVAGELRKIAKYKRTRTMPIYGGQSIGSQIRALQQGV
QVVIGTPGRILDHLRRGTLKLDKLKTLVLDEADEMLDMGFIEDIESILKETPAERQTLLF
SATMPPEVKSLSKRYMIDPQNVTINRGDVTVPLIEQVYYKVLERTKLESLSRIIDSEEVE
LGIIFCRTKRGVDELTDSLMSRGYLADGLHGDLSQAQRDRVMRKFRHTEIQLLVATDVAA
RGIDVENVTHVINFDIPQDPESYVHRIGRTGRAGKRGLALTLVTPPEFKLLKQIEKETKA
KLVAKEVPSLADVAERQTEIWRDRLVRTMQDGKLATYRAILSGLVDEFDPLDLAAAALKL
ASGEDFEAPEADYNFGETGGAPGMVRFFLNIGRSAKIGPSDLVKHISEEAGIPGGAIGKI
DIFEKFTFVEVQEESAPFVFEALRKSRINGSRINLEPARPRERQRK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgacgacatttttagaactgaaccttggcaagaagattcaacaggcgatcagtgacatg
ggtttcgaagagccgtcgccgatccaagcgcagtgcatcccggtcgtgctgaccggcagt
gacgtgatcgggcaggcgcagaccggcacaggcaagacggcggcgtttggcattccgctg
ctggaaatggcaggtcccgccaagcatgtgcaggcgctgatcctgaccccgacccgggaa
ctggcgatccaggtcgcaggcgaactgcgcaagatcgccaaatacaagcgcacccgcacc
atgccgatctacggcggtcagtcgatcggttcgcagatccgcgcgctgcagcaaggcgtg
caggtcgtcatcggcacgccggggcggattctcgaccatctgcgccgcggcacgctcaag
ctcgacaagctgaagacgctggtgctcgacgaagcggatgaaatgctcgacatgggcttt
atcgaggacatcgagtcgattctgaaagagacgccggccgagcgccagaccctgctgttc
tcggcgacgatgccgcctgaggtgaagagcctctccaagcgctacatgatcgacccgcag
aacgtgacgatcaaccgcggcgacgtgaccgtgcccttgatcgagcaggtctattacaaa
gtgctggagcgcacgaagctggagagcctctcgcggatcatcgattccgaagaggtggag
ctcggtatcatcttctgccgcaccaagcgcggcgtcgatgagttgaccgactccttgatg
agccggggctacctcgccgacgggctgcacggcgacctgtcacaggcccagcgcgaccgc
gtgatgcgcaagttccgccacacggagattcaactgctcgtggcgacagacgtcgcagcg
cgggggatcgacgtggagaacgtgacgcacgtcatcaacttcgacatcccgcaggacccg
gaatcgtacgtgcatcgcatcggccgcacggggcgcgccggcaagcgcggcttggcgctg
actttggtcacgccgccggagttcaagctgctcaagcagatcgagaaggagaccaaggcg
aagctggtcgccaaagaggtgccgtcgctcgccgatgtggcggagcggcagacggagatc
tggcgcgaccgcctggtgcgcacgatgcaggacggcaagctggccacctatcgcgcgatc
ctctccgggctcgtcgatgagtttgatccgctcgacctggctgcagccgctctgaagctg
gccagcggcgaggacttcgaagcgccggaagccgactacaacttcggcgagacgggcgga
gcgccgggcatggtgcgcttcttcctgaacatcggccgcagcgccaagatcggcccgagc
gacctcgtcaagcacatctccgaagaagccggcatccccggcggggcgatcggcaagatc
gacatcttcgagaaattcacctttgtggaagtgcaggaagagtcggcgccgttcgtgttt
gaggcgctgcgcaagtcccgcatcaacggttcccgcatcaatttggaaccggcgcgtccg
cgcgaacgccagcgcaaatag
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