KEGG   Tumebacillus avium: CBW65_17415
Entry
CBW65_17415       CDS       T04874                                 
Name
(GenBank) RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
tum  Tumebacillus avium
Pathway
tum03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CBW65_17415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tum03019]
    CBW65_17415
   03009 Ribosome biogenesis [BR:tum03009]
    CBW65_17415
Enzymes [BR:tum01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     CBW65_17415
Messenger RNA biogenesis [BR:tum03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CBW65_17415
Ribosome biogenesis [BR:tum03009]
 Prokaryotic type
  rRNA helicases
   CBW65_17415
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1
Other DBs
NCBI-ProteinID: ARU62542
UniProt: A0A1Y0IPM8
LinkDB
Position
3560094..3561674
AA seq 526 aa
MTTFLELNLGKKIQQAISDMGFEEPSPIQAQCIPVVLTGSDVIGQAQTGTGKTAAFGIPL
LEMAGPAKHVQALILTPTRELAIQVAGELRKIAKYKRTRTMPIYGGQSIGSQIRALQQGV
QVVIGTPGRILDHLRRGTLKLDKLKTLVLDEADEMLDMGFIEDIESILKETPAERQTLLF
SATMPPEVKSLSKRYMIDPQNVTINRGDVTVPLIEQVYYKVLERTKLESLSRIIDSEEVE
LGIIFCRTKRGVDELTDSLMSRGYLADGLHGDLSQAQRDRVMRKFRHTEIQLLVATDVAA
RGIDVENVTHVINFDIPQDPESYVHRIGRTGRAGKRGLALTLVTPPEFKLLKQIEKETKA
KLVAKEVPSLADVAERQTEIWRDRLVRTMQDGKLATYRAILSGLVDEFDPLDLAAAALKL
ASGEDFEAPEADYNFGETGGAPGMVRFFLNIGRSAKIGPSDLVKHISEEAGIPGGAIGKI
DIFEKFTFVEVQEESAPFVFEALRKSRINGSRINLEPARPRERQRK
NT seq 1581 nt   +upstreamnt  +downstreamnt
atgacgacatttttagaactgaaccttggcaagaagattcaacaggcgatcagtgacatg
ggtttcgaagagccgtcgccgatccaagcgcagtgcatcccggtcgtgctgaccggcagt
gacgtgatcgggcaggcgcagaccggcacaggcaagacggcggcgtttggcattccgctg
ctggaaatggcaggtcccgccaagcatgtgcaggcgctgatcctgaccccgacccgggaa
ctggcgatccaggtcgcaggcgaactgcgcaagatcgccaaatacaagcgcacccgcacc
atgccgatctacggcggtcagtcgatcggttcgcagatccgcgcgctgcagcaaggcgtg
caggtcgtcatcggcacgccggggcggattctcgaccatctgcgccgcggcacgctcaag
ctcgacaagctgaagacgctggtgctcgacgaagcggatgaaatgctcgacatgggcttt
atcgaggacatcgagtcgattctgaaagagacgccggccgagcgccagaccctgctgttc
tcggcgacgatgccgcctgaggtgaagagcctctccaagcgctacatgatcgacccgcag
aacgtgacgatcaaccgcggcgacgtgaccgtgcccttgatcgagcaggtctattacaaa
gtgctggagcgcacgaagctggagagcctctcgcggatcatcgattccgaagaggtggag
ctcggtatcatcttctgccgcaccaagcgcggcgtcgatgagttgaccgactccttgatg
agccggggctacctcgccgacgggctgcacggcgacctgtcacaggcccagcgcgaccgc
gtgatgcgcaagttccgccacacggagattcaactgctcgtggcgacagacgtcgcagcg
cgggggatcgacgtggagaacgtgacgcacgtcatcaacttcgacatcccgcaggacccg
gaatcgtacgtgcatcgcatcggccgcacggggcgcgccggcaagcgcggcttggcgctg
actttggtcacgccgccggagttcaagctgctcaagcagatcgagaaggagaccaaggcg
aagctggtcgccaaagaggtgccgtcgctcgccgatgtggcggagcggcagacggagatc
tggcgcgaccgcctggtgcgcacgatgcaggacggcaagctggccacctatcgcgcgatc
ctctccgggctcgtcgatgagtttgatccgctcgacctggctgcagccgctctgaagctg
gccagcggcgaggacttcgaagcgccggaagccgactacaacttcggcgagacgggcgga
gcgccgggcatggtgcgcttcttcctgaacatcggccgcagcgccaagatcggcccgagc
gacctcgtcaagcacatctccgaagaagccggcatccccggcggggcgatcggcaagatc
gacatcttcgagaaattcacctttgtggaagtgcaggaagagtcggcgccgttcgtgttt
gaggcgctgcgcaagtcccgcatcaacggttcccgcatcaatttggaaccggcgcgtccg
cgcgaacgccagcgcaaatag

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