KEGG   Tupaia chinensis (Chinese tree shrew): 102471693
Entry
102471693         CDS       T02978                                 

Gene name
PTCH1
Definition
(RefSeq) patched 1
  KO
K06225  patched 1
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup04024  cAMP signaling pathway
tup04340  Hedgehog signaling pathway
tup04360  Axon guidance
tup05200  Pathways in cancer
tup05205  Proteoglycans in cancer
tup05217  Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:tup00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    102471693 (PTCH1)
   04024 cAMP signaling pathway
    102471693 (PTCH1)
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    102471693 (PTCH1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    102471693 (PTCH1)
   05205 Proteoglycans in cancer
    102471693 (PTCH1)
  09162 Cancer: specific types
   05217 Basal cell carcinoma
    102471693 (PTCH1)
SSDB
Motif
Pfam: Patched Sterol-sensing
Other DBs
NCBI-GeneID: 102471693
NCBI-ProteinID: XP_006167882
LinkDB
Position
Un
AA seq 1244 aa
MFNPQLMIQTPKEEDANVLTTEALLQHLDSALQASRVHVYMYNRQWKLEHLCYKSGELIT
ETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKI
NYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLS
RKYMHWQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPKQMYEHFKGYEYVSHINWNEDK
AAAILEAWQRTYVEVVHQSVAQNSTQKVLSFTTTTLDDILKSFSDVSVIRVASGYLLMVL
PFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAA
LIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCCFTSPCVSRVI
QVEPQAYTETHDNTRYSPPPPYSSHSFAHETQITMQSTVQLRTEYDPHTHVYYTTAEPRS
EISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSLHCLEPPCTKWTLSSFAEKHYAPF
LLKPKAKVVVIFLFLGLLGVSLFGTTRVRDGLDLTDIVPRETREYDFIAAQFKYFSFYNM
YIVTQKADYPNIQHLLYDLHKSFSNVKYVMLEENKQLPKMWLHYFRDWLQGLQDAFDSDW
ETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLTKQRLVDADGIINPSAFYIYL
TAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRIPAAEPIEYAQFPFYLNGLRD
TSDFVEAIEKVRTICNNYTSLGLSSYPNGYPFLFTAPRHWLLLSISVVLACTFLVCAVFL
LNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPVVILIASVGIGVEFTVHVALAFLTA
IGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGSEFDFIVRYFFAVLAILTILGVLNG
LVLLPVLLSFFGPYPEVSPANGLNRLPTPSPEPPPSVVRFAVPPGHTNAGSDSSDSEYSS
QTTVSGISEELQHYEAQRGPGDSAHQVIVEATENPVFARSTVVHPESRHHAPSNPRQQPH
LDSGFLPSGRQGQQPRRELPKEGLRPPPYKPRRDAFEISTEGLSGPSNSRERSAPRGARS
HNPRNPAATATSSSVPGYCQPITTVTASASVTVAVHPPPVPGPGRIPRGGLCPGYEGYPE
TDHGLFEDPHVPFHVRCERRNSKVEIIELQDVECEERLRGSSSN
NT seq 3735 nt   +upstreamnt  +downstreamnt
atgtttaatcctcaactcatgatacagactccgaaagaagaagacgctaatgtcctgacc
actgaagccctcctccaacatttggactcggcgctccaggccagccgcgtgcatgtatac
atgtacaacaggcaatggaaattggaacatttgtgttacaaatcaggagaacttatcaca
gaaacaggttatatggatcagataatagaatatctttacccttgtctaattattacacct
ttggactgcttctgggaaggagcgaagttgcaatctgggaccgcatacctcctaggtaaa
cctcctttgcggtggacaaactttgaccctttggaattcctagaagagttaaagaaaata
aactatcaagtggacagctgggaggaaatgctgaataaggctgaagttggtcatggttac
atggatcgtccctgcctcaacccggctgatccagactgccctgccacggcccccaacaaa
aattcaaccaaacctcttgatatggcccttgttctgaatggtggatgtcatggattatcc
agaaagtatatgcactggcaggaggaactgattgtgggtggcacagtgaagaacagcact
ggaaaacttgtcagtgcccacgccctgcagaccatgttccagttaatgactcccaagcag
atgtacgagcacttcaaggggtacgagtatgtctcgcatatcaactggaacgaggacaaa
gcagcggccatcttggaggcgtggcagaggacctacgtggaggtggttcatcaaagtgtt
gcccagaactctacccagaaggtgctttccttcaccacgacaaccctggacgacatcctg
aaatccttctctgatgtcagcgtcatccgggtggccagcggctacttactgatggttttg
ccatttcttgctctcggcgttggtgtggatgatgttttccttctggcgcacgcatttagt
gagacaggacagaataaaagaattcctttcgaggacaggactggggagtgcctcaagcgt
actggagccagcgtggccctcacgtccatcagcaacgtcacggccttcttcatggcagcg
ctcatcccaattcctgctctgcgggccttctccctccaggcagcagtagtagtggtgttc
aattttgccatggttctgctcatttttcctgcaattctcagcatggatttataccgacgt
gaggataggagactggatatcttctgctgttttacgagcccctgtgtcagcagagtgatc
caggtggagccacaggcctacacggagacacacgacaatacccgctacagcccccccccc
ccctacagcagccacagttttgcccatgaaacgcagatcaccatgcagtccactgtccag
ctgcgcacggagtacgacccccacacccacgtgtactacaccacagccgagccacgctcc
gagatctccgtgcagcctgtcaccgtgacccaggacaccctcagctgccagagccccgag
agcacaagctccaccagggacctgctctcccagttctccgactccagcctccactgcctc
gagcccccctgtaccaagtggacactttcctcttttgctgagaagcactatgcgcctttc
ctcttaaaaccaaaagccaaggtcgtggtgatcttcctcttcttgggcttgttgggggtc
agcctttttgggaccacccgggtgagagacgggctggaccttaccgacatcgtacctcgg
gaaaccagagagtatgactttattgctgcacagttcaaatacttctctttctataacatg
tacatagtcacccagaaagcagactacccaaatatccagcacttactctatgaccttcac
aagagtttcagtaacgtgaagtatgtcatgttggaagaaaacaaacagcttcccaaaatg
tggctgcactatttccgagactggctccaaggacttcaggatgcatttgatagtgactgg
gaaactgggaaaatcatgccaaacaattacaaaaatggatcggatgatggggtcctggcc
tacaaacttctggtgcaaactggcagccgcgacaagcccatcgacatcagccagttgact
aaacagcgtctggtggacgcagatggcatcattaatcccagcgccttctacatctacctg
accgcctgggtcagcaacgatcctgtcgcctacgccgcctcccaggccaacatccggccc
caccgacccgagtgggtacatgacaaagctgactacatgccagaaaccaggctgcggatc
ccagcagcagagcccattgaatacgctcagttccctttctacctcaatggcttgcgagac
acctcagactttgtggaagcgatcgagaaggtcagaaccatctgcaacaactacacgagt
ctgggcctctccagctaccccaacggctaccccttcctcttcaccgccccccgccactgg
ctgctgctctccatcagcgtggtcttggcctgcacgttcctcgtgtgcgccgtcttcctc
ctgaacccctggacggctgggatcattgtgatggtcctggcattgatgacggtcgagctc
ttcggcatgatgggcctcattggaatcaagctcagcgccgtgcccgtggtcatcctgatc
gcttctgtcggcatcggggtggaattcaccgtccacgttgctttggcctttctgacagcc
atcggcgataagaaccgcagagcggtgctggccctcgagcacatgttcgcacctgtcctg
gacggcgccgtgtccacgctgctgggggtgctgatgctggcagggtctgagtttgacttc
atcgtcaggtacttctttgctgtcctggccatactgaccatcctgggtgttctcaacggg
ctggttttgcttccggtcctcttgtctttctttggaccctaccctgaggtatctccagcc
aatggcctgaaccgactgcccactccctcccctgagccaccccccagcgttgtccggttt
gctgtgccccccggtcacacgaacgccgggtccgattcttctgactcggagtacagttct
cagacaacggtgtcaggcatcagcgaggagcttcagcactatgaggctcagcgtggccca
ggggactctgcccaccaggtgatcgtggaagccacggaaaaccctgtcttcgcccgttcc
accgtggttcatcctgaatcaaggcatcacgcaccctcgaatcctcgacagcagccccac
ctggactcagggtttctgccctccgggcggcaaggccaacagccccgcagggaactcccc
aaagaaggcttgcggccgcctccctacaaaccgcgcagagacgctttcgaaatttctact
gaagggctttctggccctagcaatagtcgggagcgctcagccccccgtggggctcgttct
cacaaccctcggaacccagcagccactgccacgagcagctctgtgcctggctattgccag
cccatcaccactgtgacagcttccgcttccgtgactgttgccgtgcatcctccacctgtc
cccgggcctggacggatcccccgagggggactctgcccaggctacgagggctaccctgag
actgaccacgggctgtttgaggacccccacgtgccttttcacgtccggtgcgagaggagg
aattcaaaggtggagatcatagagctgcaggacgtggagtgcgaggagaggctgcgggga
agcagctctaactga

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