Tupaia chinensis (Chinese tree shrew): 102471693 Help Entry 102471693         CDS       T02978                                  Gene name PTCH1 Definition (RefSeq) patched 1   KO K06225   patched 1 Organism tup  Tupaia chinensis (Chinese tree shrew) Pathway tup04024   cAMP signaling pathway tup04340   Hedgehog signaling pathway tup04360   Axon guidance tup05200   Pathways in cancer tup05205   Proteoglycans in cancer tup05217   Basal cell carcinoma Brite KEGG Orthology (KO) [BR:tup00001]  09130 Environmental Information Processing   09132 Signal transduction    04340 Hedgehog signaling pathway     102471693 (PTCH1)    04024 cAMP signaling pathway     102471693 (PTCH1)  09150 Organismal Systems   09158 Development and regeneration    04360 Axon guidance     102471693 (PTCH1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     102471693 (PTCH1)    05205 Proteoglycans in cancer     102471693 (PTCH1)   09162 Cancer: specific types    05217 Basal cell carcinoma     102471693 (PTCH1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Patched Sterol-sensing Motif Other DBs NCBI-GeneID:  102471693 NCBI-ProteinID:  XP_006167882 LinkDB All DBs Position Un AA seq 1244 aa AA seqDB search MFNPQLMIQTPKEEDANVLTTEALLQHLDSALQASRVHVYMYNRQWKLEHLCYKSGELIT ETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKI NYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLS RKYMHWQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPKQMYEHFKGYEYVSHINWNEDK AAAILEAWQRTYVEVVHQSVAQNSTQKVLSFTTTTLDDILKSFSDVSVIRVASGYLLMVL PFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAA LIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCCFTSPCVSRVI QVEPQAYTETHDNTRYSPPPPYSSHSFAHETQITMQSTVQLRTEYDPHTHVYYTTAEPRS EISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSLHCLEPPCTKWTLSSFAEKHYAPF LLKPKAKVVVIFLFLGLLGVSLFGTTRVRDGLDLTDIVPRETREYDFIAAQFKYFSFYNM YIVTQKADYPNIQHLLYDLHKSFSNVKYVMLEENKQLPKMWLHYFRDWLQGLQDAFDSDW ETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLTKQRLVDADGIINPSAFYIYL TAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRIPAAEPIEYAQFPFYLNGLRD TSDFVEAIEKVRTICNNYTSLGLSSYPNGYPFLFTAPRHWLLLSISVVLACTFLVCAVFL LNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPVVILIASVGIGVEFTVHVALAFLTA IGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGSEFDFIVRYFFAVLAILTILGVLNG LVLLPVLLSFFGPYPEVSPANGLNRLPTPSPEPPPSVVRFAVPPGHTNAGSDSSDSEYSS QTTVSGISEELQHYEAQRGPGDSAHQVIVEATENPVFARSTVVHPESRHHAPSNPRQQPH LDSGFLPSGRQGQQPRRELPKEGLRPPPYKPRRDAFEISTEGLSGPSNSRERSAPRGARS HNPRNPAATATSSSVPGYCQPITTVTASASVTVAVHPPPVPGPGRIPRGGLCPGYEGYPE TDHGLFEDPHVPFHVRCERRNSKVEIIELQDVECEERLRGSSSN NT seq 3735 nt NT seq  +upstreamnt  +downstreamnt atgtttaatcctcaactcatgatacagactccgaaagaagaagacgctaatgtcctgacc actgaagccctcctccaacatttggactcggcgctccaggccagccgcgtgcatgtatac atgtacaacaggcaatggaaattggaacatttgtgttacaaatcaggagaacttatcaca gaaacaggttatatggatcagataatagaatatctttacccttgtctaattattacacct ttggactgcttctgggaaggagcgaagttgcaatctgggaccgcatacctcctaggtaaa cctcctttgcggtggacaaactttgaccctttggaattcctagaagagttaaagaaaata aactatcaagtggacagctgggaggaaatgctgaataaggctgaagttggtcatggttac atggatcgtccctgcctcaacccggctgatccagactgccctgccacggcccccaacaaa aattcaaccaaacctcttgatatggcccttgttctgaatggtggatgtcatggattatcc agaaagtatatgcactggcaggaggaactgattgtgggtggcacagtgaagaacagcact ggaaaacttgtcagtgcccacgccctgcagaccatgttccagttaatgactcccaagcag atgtacgagcacttcaaggggtacgagtatgtctcgcatatcaactggaacgaggacaaa gcagcggccatcttggaggcgtggcagaggacctacgtggaggtggttcatcaaagtgtt gcccagaactctacccagaaggtgctttccttcaccacgacaaccctggacgacatcctg aaatccttctctgatgtcagcgtcatccgggtggccagcggctacttactgatggttttg ccatttcttgctctcggcgttggtgtggatgatgttttccttctggcgcacgcatttagt gagacaggacagaataaaagaattcctttcgaggacaggactggggagtgcctcaagcgt actggagccagcgtggccctcacgtccatcagcaacgtcacggccttcttcatggcagcg ctcatcccaattcctgctctgcgggccttctccctccaggcagcagtagtagtggtgttc aattttgccatggttctgctcatttttcctgcaattctcagcatggatttataccgacgt gaggataggagactggatatcttctgctgttttacgagcccctgtgtcagcagagtgatc caggtggagccacaggcctacacggagacacacgacaatacccgctacagcccccccccc ccctacagcagccacagttttgcccatgaaacgcagatcaccatgcagtccactgtccag ctgcgcacggagtacgacccccacacccacgtgtactacaccacagccgagccacgctcc gagatctccgtgcagcctgtcaccgtgacccaggacaccctcagctgccagagccccgag agcacaagctccaccagggacctgctctcccagttctccgactccagcctccactgcctc gagcccccctgtaccaagtggacactttcctcttttgctgagaagcactatgcgcctttc ctcttaaaaccaaaagccaaggtcgtggtgatcttcctcttcttgggcttgttgggggtc agcctttttgggaccacccgggtgagagacgggctggaccttaccgacatcgtacctcgg gaaaccagagagtatgactttattgctgcacagttcaaatacttctctttctataacatg tacatagtcacccagaaagcagactacccaaatatccagcacttactctatgaccttcac aagagtttcagtaacgtgaagtatgtcatgttggaagaaaacaaacagcttcccaaaatg tggctgcactatttccgagactggctccaaggacttcaggatgcatttgatagtgactgg gaaactgggaaaatcatgccaaacaattacaaaaatggatcggatgatggggtcctggcc tacaaacttctggtgcaaactggcagccgcgacaagcccatcgacatcagccagttgact aaacagcgtctggtggacgcagatggcatcattaatcccagcgccttctacatctacctg accgcctgggtcagcaacgatcctgtcgcctacgccgcctcccaggccaacatccggccc caccgacccgagtgggtacatgacaaagctgactacatgccagaaaccaggctgcggatc ccagcagcagagcccattgaatacgctcagttccctttctacctcaatggcttgcgagac acctcagactttgtggaagcgatcgagaaggtcagaaccatctgcaacaactacacgagt ctgggcctctccagctaccccaacggctaccccttcctcttcaccgccccccgccactgg ctgctgctctccatcagcgtggtcttggcctgcacgttcctcgtgtgcgccgtcttcctc ctgaacccctggacggctgggatcattgtgatggtcctggcattgatgacggtcgagctc ttcggcatgatgggcctcattggaatcaagctcagcgccgtgcccgtggtcatcctgatc gcttctgtcggcatcggggtggaattcaccgtccacgttgctttggcctttctgacagcc atcggcgataagaaccgcagagcggtgctggccctcgagcacatgttcgcacctgtcctg gacggcgccgtgtccacgctgctgggggtgctgatgctggcagggtctgagtttgacttc atcgtcaggtacttctttgctgtcctggccatactgaccatcctgggtgttctcaacggg ctggttttgcttccggtcctcttgtctttctttggaccctaccctgaggtatctccagcc aatggcctgaaccgactgcccactccctcccctgagccaccccccagcgttgtccggttt gctgtgccccccggtcacacgaacgccgggtccgattcttctgactcggagtacagttct cagacaacggtgtcaggcatcagcgaggagcttcagcactatgaggctcagcgtggccca ggggactctgcccaccaggtgatcgtggaagccacggaaaaccctgtcttcgcccgttcc accgtggttcatcctgaatcaaggcatcacgcaccctcgaatcctcgacagcagccccac ctggactcagggtttctgccctccgggcggcaaggccaacagccccgcagggaactcccc aaagaaggcttgcggccgcctccctacaaaccgcgcagagacgctttcgaaatttctact gaagggctttctggccctagcaatagtcgggagcgctcagccccccgtggggctcgttct cacaaccctcggaacccagcagccactgccacgagcagctctgtgcctggctattgccag cccatcaccactgtgacagcttccgcttccgtgactgttgccgtgcatcctccacctgtc cccgggcctggacggatcccccgagggggactctgcccaggctacgagggctaccctgag actgaccacgggctgtttgaggacccccacgtgccttttcacgtccggtgcgagaggagg aattcaaaggtggagatcatagagctgcaggacgtggagtgcgaggagaggctgcgggga agcagctctaactga

Tupaia chinensis (Chinese tree shrew): 102502271 Help Entry 102502271         CDS       T02978                                  Gene name PTCH2 Definition (RefSeq) patched 2   KO K11101   patched 2 Organism tup  Tupaia chinensis (Chinese tree shrew) Pathway tup04340   Hedgehog signaling pathway tup05200   Pathways in cancer tup05217   Basal cell carcinoma Brite KEGG Orthology (KO) [BR:tup00001]  09130 Environmental Information Processing   09132 Signal transduction    04340 Hedgehog signaling pathway     102502271 (PTCH2)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     102502271 (PTCH2)   09162 Cancer: specific types    05217 Basal cell carcinoma     102502271 (PTCH2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Patched Sterol-sensing MMPL Motif Other DBs NCBI-GeneID:  102502271 NCBI-ProteinID:  XP_014445371 LinkDB All DBs Position Un AA seq 1207 aa AA seqDB search MARSPPLGDLPPGYTLPALSAAPQILAGTLKAPLWLRAYFQGLLFSLGCGIQRHCGKALF LGLLAFGALALGLRVAVIETDLEQLWVEVGSRVSQELHYTKEKLGEEAAYTSQMLIQTAR QQGENILTPEALSLHLQAALTASKVQVSLYGKSWDLNKICYKSGVPLIENGMIERMIEKL FPCVILTPLDCFWEGAKLQGGSAYLPGRPDIQWTNLDPQQLLEELGPFATLEGFRELLAK AQVGQAYVGRPCLHPDDLHCPPSAPNRHSRQAPNVAQELSGGCHGFSHKFMHWQEELLLG GIARDSQGQLLRAEALQSTFLLMSPRQLYEHFRGDYQTHDIGWSEEQAGTVLQAWQRRFV QLAQEALPENASQQVHAFSSTTLDDILHAFSQVSAARVAGGYLLMLAYACVTMLRWDCAQ SQGAVGLAGVLLVALAVASGLGLCALLGITFNAATTQVLPFLALGIGVDDIFLLAHAFTE APPGTPLQERTGECLQRTGTSVTLTSINNMVAFFMAALVPIPALRAFSLQAAIVVGCNFA AVMLVFPAVLSLDLRRRHCQRLDVLCCFSSPCSARVIQLLPQELGDGTVPVGITHLTATV QAFTHCEASTQHVVTILPPQTHLVAPASDPPGSELFSPGGSTRDLLGQEESTRQKTACKS PPCAHWNLAHFARYQFAPLLLQSHIKVMVLVLFGALVGLSLYGATLVQDGLALTDVVPQG TKEHAFLSAQLRYFSLYEVALVTQGGFDYAYSQRALFDLHQRFSSLKAVLPPPATQAPRT WLHYYRDWLQGIQAAFDQDWASGRITHHSYRNGSEDGALAYKLLIQTGDAQEPLDFSQLT SRKLVDTEGLIPPELFYVGLTMWVSSDPMGLAASQANFYPPPPEWLHDKYDATGENLRIP AAQPLEFAQFPFLLHGLQKTADFVEAIEGARAACAEASQAGVHAYPSGSPFLFWEQYLGL RRCFLLAICILLVCTFLVCALLLLSPWTAGLVVLVLTMMTVELFGIMGFLGIKLSAIPVV ILVASVGIGVEFTVHVALGFLTTQGSRNLRAARALEHTFAPVTDGAVSTLLGLLMLAGSN FDFIVRYFFVVLTVLTLLGLLHGLVLLPVLLSILGPPPEEVQLYKESPEVLSPPAARRGG LRWGVAPTPPQSFARVTTSMTVALSPPPLPGAYVHSASDEPTWSSAITLAANGSDNLSAR GPCPATA NT seq 3624 nt NT seq  +upstreamnt  +downstreamnt atggctcggtcgccgcccctcggggatctgcccccgggctacacactcccagctctatcc gcagcaccccagatcctagccgggaccttgaaggctccgctctggctccgcgcttacttt cagggcctgctcttctctctgggctgtgggatccagagacactgtggcaaagcactcttc ctgggcctgttagcctttggggccttggccctgggtctccgcgtggcagttattgagaca gacctggaacagctctgggtagaagtgggcagccgggtgagccaggagctgcattacacc aaggagaagctgggggaggaagctgcgtacacctcccagatgctgatacagactgcacgc cagcagggggagaacatcctcacacctgaggcacttagcctccacctccaggcagccctc actgccagcaaagtgcaagtatcgctctacggaaagtcctgggatttgaacaaaatctgc tacaagtcaggagttccccttattgaaaatggaatgattgagcggatgattgagaagctg tttccgtgtgtgatcctcactcccctcgactgcttctgggagggagccaaactccaaggg ggctctgcctacttgccgggtcgcccagatatccagtggaccaacctggacccacagcag ctgctagaggagctgggcccctttgccacccttgagggcttccgggagctactagccaag gcacaggtgggccaggcctacgtgggacgcccctgtctgcaccccgacgacctgcattgc ccacctagtgcccccaatcgtcacagcaggcaggctcccaatgtggctcaggaactgagt gggggctgccatggcttctcccacaagtttatgcactggcaggaggaattgttgctggga ggcatagccagagactcccaaggacagctgctgagggcagaggccctgcagagcaccttc ctgctaatgagtccccgccagctgtatgagcacttccggggtgactaccagacacatgac attggctggagcgaggagcaggctggcacggtgctgcaggcctggcagcgacgcttcgtg cagctggctcaggaggccctgcctgagaacgcgtcccagcaagtccacgccttctcctcc accaccctggatgacatcctgcacgccttctctcaagtcagtgctgcccgagtggcggga ggctacctgctcatgctagcctacgcctgcgtgacgatgctgcggtgggactgcgcccag tcacagggcgctgtgggccttgctggggtgctgttggtggccctggcagtggcctcaggc cttgggctctgtgccctgcttggcatcaccttcaatgctgccactactcaggtgctgccc ttcttggcgctgggaattggcgtggatgacatattcctgttggcacatgccttcacagag gctccccctggcacccctctgcaggagcgcacgggggagtgtctgcagcgcacaggcacc agtgtcacactcacctccatcaacaacatggtcgccttcttcatggccgccctcgttccc atccctgcactgagggccttctccttgcaggcggccatagtggttggctgcaacttcgca gctgtcatgcttgtcttcccagctgtcctcagcctggatctgcgccggcgccactgccag cgcctcgatgttctctgctgcttctccagcccctgctctgcccgagtgattcagcttctg ccccaggagctgggggatgggacagtaccagtgggcatcacccacctgaccgccacggtt caagcctttacccactgtgaagccagcacccagcatgtggtcaccatcctacctccccaa acccacctggttgccccggcctctgacccaccgggctctgagctcttcagccctggaggg tccacacgagaccttctaggccaggaggaaagcaccaggcagaagacagcctgcaagtct ccaccctgtgctcactggaatcttgcccatttcgcccgctaccagtttgcacccctgctg ctccaatcccatatcaaggtcatggtgctggtgctctttggggctcttgtgggcctaagc ctctatggagccaccttggtacaggacgggctggccctgaccgatgtggtgcctcagggc accaaggagcatgccttcctgagtgcccagctcaggtacttctccttgtatgaggtggcc ctggtgacccagggtggctttgactacgcctactcccaacgcgccctctttgatctgcac cagcgcttcagttccctcaaggccgtgctgcccccgcctgccacccaggcaccccgcacc tggctgcactattaccgcgactggctacagggaatccaggctgcctttgaccaagactgg gcttctgggcgcatcacccaccattcgtaccgcaatggttctgaggacggggcccttgcc tacaagctgctcatccagactggggatgctcaggaacccttggatttcagccagctgacc tcaaggaagctagtggacacagagggactgattccacccgagctcttctacgtggggctg accatgtgggtgagcagcgaccctatgggtctggcagcctcacaggctaacttctacccg ccgcctcctgagtggttgcacgacaagtacgacgccaccggggagaacctgcgcatccca gcggcccagcctctggagtttgcccagttccccttcctgctgcacggcctccagaagaca gcagactttgtggaggccatcgagggggcccgggcagcgtgcgcagaggccagccaggcc ggggtgcatgcctaccccagtggctcccccttcctcttctgggagcagtacctgggcctg cggcgctgcttcctgctggccatctgcatcctgctcgtgtgcacgttcctcgtctgtgcc ctgctgctgctcagtccctggacggctggcctcgtggtgctggtcctgacgatgatgacc gtggagctcttcggtatcatggggttcctgggcatcaagctgagcgccattcctgtggtg atcctcgtggcttcagtaggcattggtgtcgagttcacagtccacgtggctctgggcttc ctgaccacccaggggagccggaacttgcgggctgcccgtgccctcgagcacacgtttgcc cccgtgaccgacggagctgtctccacgttgctgggtctgctcatgctcgctggttccaac tttgacttcatagtcaggtacttctttgtggtgctgacagtgctcacactcctgggcctc ctccatggactcgtgctgttgcctgtgctgctgtccatcctgggacccccgccagaggag gtacagttgtacaaggagagcccagaggtcctgagccccccggctgcacggagaggtggg ctcaggtggggcgtggctcccaccccgccccagagcttcgccagagtgactacctccatg acggtggccctctccccacccccgctgcctggtgcctatgtccactcagcctccgatgag cccacctggtcctctgccatcaccctagctgccaacggctctgacaacctcagtgctaga ggaccatgtccagccactgcgtga

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