Tupaia chinensis (Chinese tree shrew): 102472614
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Entry
102472614 CDS
T02978
Gene name
DDB2
Definition
(RefSeq) damage specific DNA binding protein 2
KO
K10140
DNA damage-binding protein 2
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03420
Nucleotide excision repair
tup04115
p53 signaling pathway
tup04120
Ubiquitin mediated proteolysis
tup05161
Hepatitis B
tup05169
Epstein-Barr virus infection
tup05200
Pathways in cancer
tup05202
Transcriptional misregulation in cancer
tup05210
Colorectal cancer
tup05212
Pancreatic cancer
tup05213
Endometrial cancer
tup05214
Glioma
tup05216
Thyroid cancer
tup05217
Basal cell carcinoma
tup05218
Melanoma
tup05220
Chronic myeloid leukemia
tup05222
Small cell lung cancer
tup05223
Non-small cell lung cancer
tup05224
Breast cancer
tup05225
Hepatocellular carcinoma
tup05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102472614 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
102472614 (DDB2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
102472614 (DDB2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102472614 (DDB2)
05202 Transcriptional misregulation in cancer
102472614 (DDB2)
09162 Cancer: specific types
05210 Colorectal cancer
102472614 (DDB2)
05212 Pancreatic cancer
102472614 (DDB2)
05225 Hepatocellular carcinoma
102472614 (DDB2)
05226 Gastric cancer
102472614 (DDB2)
05214 Glioma
102472614 (DDB2)
05216 Thyroid cancer
102472614 (DDB2)
05220 Chronic myeloid leukemia
102472614 (DDB2)
05217 Basal cell carcinoma
102472614 (DDB2)
05218 Melanoma
102472614 (DDB2)
05213 Endometrial cancer
102472614 (DDB2)
05224 Breast cancer
102472614 (DDB2)
05222 Small cell lung cancer
102472614 (DDB2)
05223 Non-small cell lung cancer
102472614 (DDB2)
09172 Infectious disease: viral
05161 Hepatitis B
102472614 (DDB2)
05169 Epstein-Barr virus infection
102472614 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tup04121
]
102472614 (DDB2)
03400 DNA repair and recombination proteins [BR:
tup03400
]
102472614 (DDB2)
Ubiquitin system [BR:
tup04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
102472614 (DDB2)
DNA repair and recombination proteins [BR:
tup03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
102472614 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
T2SSG
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
102472614
NCBI-ProteinID:
XP_006157865
UniProt:
L9JER7
LinkDB
All DBs
Position
Un
AA seq
427 aa
AA seq
DB search
MAPRKRPETQKTCEVVLRPRSKRSRSPQELEPEAKKLSGKGSGSSRRHDSDGLWEGLASQ
QVPPPCSSIVKAIDQYKLGRATWPSLQQGLQQSFSNSLASYRIFQKAAPFDRRATSLAWH
PTHPSTLAVGSKGGDILLWNFGIKDTPTFIKGIGAGGSITGMKFNPLNTDQFFTSSMEGM
TRLQDFKGNVLRVFTTSDNCNVWFCSLDVSAKSRMVVTGDNVGNVVLLNMDGKELWNLRM
HKKKVTHVALNPCCDWLLATASVDQTVKLWDLRQVRGKASFLSSLPHRHPVNAASFSPDG
ARLLTTDQKNEIRVYSASQWECPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPN
FKSCNPYELRTIDVFDGSSGKMMCQLYDPESSGIISLNEFNPMGDTLASAMGYHILIWSR
EEAGTQK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaggaaacgcccagaaacccagaagacctgtgaggttgtgttacgccccagg
agcaagaggagcagaagtccccaggagctggagcccgaggccaagaagctcagtgggaag
ggctccggttccagcagaagacatgactcagacggcctttgggaggggttggctagccag
caggtcccgccaccatgcagcagcatcgtcaaggccatcgaccagtataagctgggcaga
gccacctggccgtcgctgcagcagggtctccagcagtccttttcaaactctctggcttcc
taccggatattccaaaaggccgccccctttgacaggagggctacatccttggcgtggcac
ccgactcaccccagcaccctggctgtgggatccaaagggggagatatcttgctctggaat
tttggaataaaggatacacctaccttcattaaagggattggagctggagggagcatcact
gggatgaagtttaaccctcttaataccgaccagtttttcacctcctccatggagggaatg
actcggctgcaagactttaaaggcaacgttctccgtgttttcaccacctcagacaactgc
aacgtctggttttgcagcctggatgtgtctgccaaaagccgaatggtggtcacgggagac
aacgtgggaaatgtggtcctgctgaacatggacggcaaggagctttggaatctcagaatg
cacaaaaagaaagtcacgcatgtggccctgaacccatgctgtgattggctcctggccacg
gcctccgtagatcaaacagtgaaactctgggacctgcgccaggttagagggaaagccagc
ttcctgtcctcgctgccgcacaggcatcctgtcaacgcagcttctttcagtcctgatgga
gcccggctcctgaccacagaccagaagaatgagatccgggtttactctgcctcccagtgg
gagtgccccctgggcctgatcccgcaccctcaccggcacttccagcacctcacacccatc
aaggcagcctggcatcctcggtacaacctcattgtcgtgggccgatacccagatcctaat
ttcaaaagttgtaacccctacgaattaaggacgattgatgtgtttgatggcagctccgga
aagatgatgtgccagctctatgacccagaatcttctgggatcatctcgctcaatgagttc
aatcccatgggggacaccctggcctcggcaatgggttatcacatcctcatttggagccgg
gaggaagctgggacacagaagtga
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