Tupaia chinensis (Chinese tree shrew): 102475725
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Entry
102475725 CDS
T02978
Symbol
APTX
Name
(RefSeq) aprataxin
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102475725 (APTX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tup03400
]
102475725 (APTX)
Enzymes [BR:
tup01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
102475725 (APTX)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
102475725 (APTX)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
102475725 (APTX)
DNA repair and recombination proteins [BR:
tup03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
102475725 (APTX)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
102475725 (APTX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
FHA_2
zf-C2HE
HIT
FHA
Glycoamylase
zf-C2H2_6
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
102475725
NCBI-ProteinID:
XP_006143157
LinkDB
All DBs
Position
Un
AA seq
342 aa
AA seq
DB search
MMRMCWLVRQDSRHQRIKLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQ
VGVNPTSIDSVIIGKDQEMKLQPGQVLHMVNRLYPYIVEFEEKTKSPDLEVQRKRKRSEN
SDSVEGDAAQEAESGTELEPGSSPSQYSVPPKKEKGTATKKESLGHWSQGLKISMQDPKM
QVYKDDQVVVIKDKYPKARHHWLVLPWASISSLKAVTREHLELLKHMHTVGEKVIADFAG
SSELRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVMRMVQET
GRVTVRDGMPELLKLPLRCHECQQLLPSIPQLKEHLKKHWTK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcatgtgctggttggtgagacaggatagccggcaccagcgaatcaaacttcca
catttggaagcagttgtgattgggcgtggcccagagaccaagatcacagataagaaatgt
tctcgacagcaagtacaattgaaagcagagtgtaacaagggatatgtcaaggtaaagcag
gtaggggtaaatcccaccagcatcgactcagtcataattgggaaggatcaagaaatgaag
ctgcagcctggccaggttctccacatggtgaacagactttatccatatattgtagagttt
gaggaaaagacaaagagtcctgacctagaagtgcagaggaagagaaagaggtcagaaaac
agtgattctgtagaaggggatgctgcccaagaagctgagtctgggacagaactggaacct
gggagcagtcctagccaatattctgtgcccccaaagaaggagaaaggtacagctaccaaa
aaggagtcactgggccactggagccaaggcttgaagatttctatgcaggaccccaaaatg
caggtttacaaagatgatcaggtggtggtgattaaggataaataccctaaggctcgtcac
cattggttggtcttaccatgggcctccatttctagtctgaaggctgtgaccagggaacac
ctggaactcctcaaacatatgcacactgttggggaaaaggtgattgcagattttgctggg
tccagcgagctccgcttccgattgggctaccatgccattcccagcatgagccatgtgcac
cttcatgtgatcagccaggattttgattctccttgccttaaaaacaaaaaacactggaat
tcttttaatacagaatacttcctagaatcacaagctgtgatgaggatggtacaagagact
ggcagagtgactgtccgagatggaatgcctgagctcttgaagctgccccttcgttgtcac
gagtgccagcagctgctgccttctatccctcagctgaaagagcatctcaagaagcactgg
acaaagtga
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integrated database retrieval system