KEGG   Tupaia chinensis (Chinese tree shrew): 102475725
Entry
102475725         CDS       T02978                                 
Symbol
APTX
Name
(RefSeq) aprataxin
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tup00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102475725 (APTX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tup03400]
    102475725 (APTX)
Enzymes [BR:tup01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     102475725 (APTX)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     102475725 (APTX)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     102475725 (APTX)
DNA repair and recombination proteins [BR:tup03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     102475725 (APTX)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     102475725 (APTX)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA Glycoamylase zf-C2H2_6 zf-C2H2_4
Other DBs
NCBI-GeneID: 102475725
NCBI-ProteinID: XP_006143157
LinkDB
Position
Un
AA seq 342 aa
MMRMCWLVRQDSRHQRIKLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQ
VGVNPTSIDSVIIGKDQEMKLQPGQVLHMVNRLYPYIVEFEEKTKSPDLEVQRKRKRSEN
SDSVEGDAAQEAESGTELEPGSSPSQYSVPPKKEKGTATKKESLGHWSQGLKISMQDPKM
QVYKDDQVVVIKDKYPKARHHWLVLPWASISSLKAVTREHLELLKHMHTVGEKVIADFAG
SSELRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVMRMVQET
GRVTVRDGMPELLKLPLRCHECQQLLPSIPQLKEHLKKHWTK
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgatgcgcatgtgctggttggtgagacaggatagccggcaccagcgaatcaaacttcca
catttggaagcagttgtgattgggcgtggcccagagaccaagatcacagataagaaatgt
tctcgacagcaagtacaattgaaagcagagtgtaacaagggatatgtcaaggtaaagcag
gtaggggtaaatcccaccagcatcgactcagtcataattgggaaggatcaagaaatgaag
ctgcagcctggccaggttctccacatggtgaacagactttatccatatattgtagagttt
gaggaaaagacaaagagtcctgacctagaagtgcagaggaagagaaagaggtcagaaaac
agtgattctgtagaaggggatgctgcccaagaagctgagtctgggacagaactggaacct
gggagcagtcctagccaatattctgtgcccccaaagaaggagaaaggtacagctaccaaa
aaggagtcactgggccactggagccaaggcttgaagatttctatgcaggaccccaaaatg
caggtttacaaagatgatcaggtggtggtgattaaggataaataccctaaggctcgtcac
cattggttggtcttaccatgggcctccatttctagtctgaaggctgtgaccagggaacac
ctggaactcctcaaacatatgcacactgttggggaaaaggtgattgcagattttgctggg
tccagcgagctccgcttccgattgggctaccatgccattcccagcatgagccatgtgcac
cttcatgtgatcagccaggattttgattctccttgccttaaaaacaaaaaacactggaat
tcttttaatacagaatacttcctagaatcacaagctgtgatgaggatggtacaagagact
ggcagagtgactgtccgagatggaatgcctgagctcttgaagctgccccttcgttgtcac
gagtgccagcagctgctgccttctatccctcagctgaaagagcatctcaagaagcactgg
acaaagtga

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