Tupaia chinensis (Chinese tree shrew): 102483075 Help Entry 102483075         CDS       T02978                                  Symbol RAG1 Name (RefSeq) recombination activating 1   KO K10628   V(D)J recombination-activating protein 1 [EC:2.3.2.27] Organism tup  Tupaia chinensis (Chinese tree shrew) Pathway tup04068   FoxO signaling pathway tup05340   Primary immunodeficiency Brite KEGG Orthology (KO) [BR:tup00001]  09130 Environmental Information Processing   09132 Signal transduction    04068 FoxO signaling pathway     102483075 (RAG1)  09160 Human Diseases   09163 Immune disease    05340 Primary immunodeficiency     102483075 (RAG1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:tup04121]     102483075 (RAG1) Enzymes [BR:tup01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      102483075 (RAG1) Ubiquitin system [BR:tup04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     102483075 (RAG1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RAG1 RAG1_imp_bd zf-RAG1 zf-C3HC4 zf-C3HC4_2 zf-RING_6 zf-RING_2 zf-RING_10 zf-C3HC4_4 zf-RING_UBOX Motif Other DBs NCBI-GeneID:  102483075 NCBI-ProteinID:  XP_006165421 LinkDB All DBs Position Un AA seq 1054 aa AA seqDB search MAVSLPPTLGLSSAPEEIQHPHIKFSEWKFKLFRVRSFEKPPEEAQKEKKDPAEGKPSLE QSPAAPDKVDGQKPVLTQPAVKPHPKFSKKFHEDGKARDKATHHANLRHLCRICGNSLKT DEHNRRYPVHGPVDSKIQGLLRKKEKRATSWPDLIAKVFRIDVKADVDSIHPTEFCHNCW SIMHRRFXXXXXXXXXXXRRAPSDVYFPRNTAMEWHPHTASCDICQSARQGLKRKSHPPN AQLSKKLKPAPDRARQAHRHKGRAQARVGSNDVMKKIANCGQMHLSTTLLAVDFPAHFVK AISCQICEHILADPVETTCKHVFCRVCILRCLKVMGSHCPACRYPCFPTDLETPVKSFLS ILNSLVVRCPAKECSEEVSLEKYNHHVSSHKESKDTLVHINKGGRPRQHLLSLTRRAQKH RLRELKLQVKAFADKEEGGDVKSVCLTLFLLALRARNEHRQADELEAIMQGRGSGLHAAV CLAIRVNTFLSCSQYHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGHHHFEWQPPLKNV SSSTDVGIIDGLSGLASSVDDYPVDTIAKRFRYDCALVSALMDMEEAILEGLRALGLADY LGGPFTVVVKESCDGMGDVSEKHGSGPAVPEKAVRFSFTVMQVTATLGARAVKVFEEAKP NSELCCKPLCLMLADESDHETLTAILSPLIAEREAMKGSALMLEMGGIRRTFRFVFRGTG YDEKLVREVEGLEASGSVYICTLCDATRLEASQNLVLHSITRSHAENLQRYEVWRANPYH ESAEELRDRVKGVSAKPFMETVPSIDALHCDIGNAAEFYKLFQLEIGEVYKHPDAPKEER RRWQATLDKHLRKKMNLKPIMRMNGNFARRLMTAETVDAVCELIPSQERHEALRELMDLY LKMKPVWRSSCPAKECPEALCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEI IERDGSIGAWASEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAH KALKDSGFTVTSQAGLGDPLSIEDSLESQESMEF NT seq 3165 nt NT seq  +upstreamnt  +downstreamnt atggctgtctctttgccacccaccctgggactcagttctgccccagaggaaattcaacac ccacatattaaattttcagaatggaagtttaagctattcagggtgagatcctttgaaaag ccacccgaagaagctcaaaaggaaaagaaggatcctgcggaggggaaaccctctttggag cagtctcctgcagccccagacaaggttgatggtcagaagcccgtcctgactcaaccagca gtaaagcctcaccctaagttttcaaagaaattccatgaggacgggaaagcgagagacaaa gcaactcaccacgccaacctccggcacctctgccgcatctgcgggaattctttgaaaacg gatgagcacaataggagatacccggtccacgggcccgtggacagtaaaatccaaggcctc ctacgaaagaaagagaagagagccacttcctggccagacctcattgccaaggttttccgg atcgatgtgaaggccgatgtggactcgattcaccccactgagttctgccacaactgctgg agcatcatgcacaggaggttcagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggagg gccccgagtgacgtttacttcccaaggaacaccgccatggagtggcacccccatacagcc tcctgtgacatctgccagtctgcccgtcagggactcaagaggaagagtcatccgcccaat gcacagctcagcaaaaaactcaagcccgcccccgaccgagcaagacaagctcaccggcac aagggaagagcccaggccagggtggggagtaacgacgtcatgaagaagattgccaactgc ggtcagatgcacctcagcaccacgctgctggccgtggacttccccgcccacttcgtgaag gccatctcctgccagatctgtgagcacatcctggccgaccctgtggagaccacctgtaag cacgtgttctgcagggtctgcatcctcaggtgcctcaaggtcatgggcagccactgccct gcctgccggtacccgtgcttccccaccgacctggaaaccccggtgaagtcctttctaagc atcttgaattctctggtggtgagatgcccagccaaagagtgcagtgaggaggtcagtctg gaaaagtataatcaccacgtgtcaagccacaaggaatccaaagacactttagtgcatatt aataaaggaggccgcccccgccagcatctcctgtcgctgacccggagggcccagaagcac cggctgagggaactcaagctgcaagtcaaggcctttgcggacaaagaagaaggtggcgac gtgaagtccgtgtgcctgactctgttcctgctggcgctgagggccaggaacgagcacagg caggcggacgagctggaggccatcatgcagggccggggttcgggcctgcacgccgcggtc tgcctggccatccgcgtgaacaccttcctgagctgcagccagtaccacaagatgtacagg acggtgaaagccatcaccgggcggcagatcttccagcctctgcacgccctccgcaacgcc gagaaggtcctgctgccgggccaccaccacttcgagtggcagccccctctgaagaacgtg tcctccagcaccgacgtgggcatcatcgacgggctgtcaggcctggcctcctcggtggac gattacccggtggacaccatcgccaagaggttccgctacgactgcgcgttggtgtcggcg ctcatggacatggaggaggccatcctggaggggctgcgcgccctgggcctggcggactac ctgggcggcccgttcaccgtggtggtcaaggagtcctgcgacggcatgggcgacgtgagc gagaagcacggcagcggcccggccgtccccgagaaggccgtgcgcttctccttcaccgtc atgcaggtcacggccacgctgggcgctcgcgccgtgaaggtgttcgaggaggccaagccc aactccgagctgtgctgcaagccgctgtgcctcatgctggccgacgagtcggaccacgag acgctgaccgccatcctgagcccgctgatcgccgagcgcgaggccatgaagggcagcgcg ctgatgctggagatgggcggcatccgcaggaccttccgcttcgtcttcaggggcaccggc tacgacgagaagctggtgcgggaagtggagggcctggaggcatccggctccgtctacatc tgcacgctgtgcgacgccacccgcctggaggcctcgcagaacctggtcttgcactccatc acccgcagccacgccgagaacctgcagcgctacgaggtgtggcgggccaacccgtaccac gagtctgcggaggagctgcgggaccgcgtcaagggggtctccgccaagcccttcatggag accgtgccttccatcgacgcgctgcactgcgacattggcaacgcggccgagttctacaag ctcttccagctggagatcggggaggtgtacaagcaccccgacgcccccaaggaggagagg aggcgctggcaggccacgctggacaagcacctccgcaagaagatgaacctgaagcccatc atgcggatgaacggcaacttcgcccggaggctcatgaccgcagagacggtggacgccgtg tgcgagctcattccctcccaggagaggcacgaggccctccgggagctgatggacctctac ctgaagatgaagcctgtgtggcgctcctcctgccccgccaaggagtgcccggaagccctc tgccagtacagcttcaattctcagcgcttcgccgagctcctgtctaccaagttcaagtac aggtacgagggcaaaatcaccaattactttcacaaaaccctggcacatgttcctgagatt atcgagagagatggctccataggggcgtgggccagtgaggggaacgagtcgggcaacaaa ctgttcaggcgcttccggaagatgaatgccaggcagtccaagtgctacgagatggaagat gtcctcaaacaccactggctgtatacctccaaatacctgcagaagtttatgaatgctcat aaagcattaaaagactctgggtttactgttacctctcaggcaggcttaggggatccatta agtatagaggactccctggagagccaagaatccatggaattttaa

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