Tupaia chinensis (Chinese tree shrew): 102483981
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Entry
102483981 CDS
T02978
Gene name
SHH
Definition
(RefSeq) sonic hedgehog
KO
K11988
sonic hedgehog
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup04340
Hedgehog signaling pathway
tup04360
Axon guidance
tup05200
Pathways in cancer
tup05205
Proteoglycans in cancer
tup05217
Basal cell carcinoma
tup05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
102483981 (SHH)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
102483981 (SHH)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102483981 (SHH)
05205 Proteoglycans in cancer
102483981 (SHH)
09162 Cancer: specific types
05226 Gastric cancer
102483981 (SHH)
05217 Basal cell carcinoma
102483981 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tup01002
]
102483981 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tup00536
]
102483981 (SHH)
Peptidases and inhibitors [BR:
tup01002
]
Cysteine peptidases
Family C46: hedgehog family
102483981 (SHH)
Glycosaminoglycan binding proteins [BR:
tup00536
]
Heparan sulfate / Heparin
Morphogens
102483981 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Peptidase_M15_3
Hint
Motif
Other DBs
NCBI-GeneID:
102483981
NCBI-ProteinID:
XP_006143886
LinkDB
All DBs
Position
Un
AA seq
317 aa
AA seq
DB search
MLPLARCLLVVLLSSLLVCSGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQWPGV
KLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKAH
IHCSVRAGSRPGRAEPGAEPFIGIRTRRSACQAGSCDSRLGLADAPVGFRGLRRASNAPS
PHRLTVARGGALDFGLSLWVQREEALCHSRGWKEKGPGAAEAPGAGVHWYSQLLYRIGTW
LLDSEALHPLGMALTSS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgctgccgctggcccgctgtctgctggtggtcctcctctcctcgctgctggtgtgctcg
gggctggcctgcgggccgggcaggggattcgggaagaggcggcaccccaagaagctgacc
cctttagcctacaagcagtttatccctaatgtagccgagaagaccctgggggccagcgga
agatatgaagggaagatctccagaaactcggagagatttaaggaactcacccccaattac
aaccccgacatcatatttaaggatgaagaaaacaccggagcagaccggctgatgactcag
aggtgtaaggacaagctgaacgccttggccatctccgtgatgaaccagtggccaggagtg
aagctgcgggtgaccgagggctgggacgaggatggccaccactcagaggagtcgctgcac
tacgagggccgcgccgtggacatcaccacgtccgaccgcgaccgcagcaagtacggcatg
ttggcgcgcctggcggtggaggccggcttcgactgggtgtactacgagtccaaggcccac
atccactgctcggtgagagcagggtcccgcccggggagagcagagcccggcgccgagccg
ttcatcggcattcggacccggcgcagtgcgtgtcaggcagggtcgtgcgactcgcgactc
gggctcgccgacgccccggtcggattccgggggctgcggagggcctccaacgcccccagc
cctcaccggctcaccgtggcccgcggcggggcgttggactttgggctcagcctctgggtc
cagcgcgaggaggcgctgtgccattcgcgggggtggaaggaaaaggggcccggcgcggcc
gaggcgcccggcgcgggcgtgcactggtactcgcagctgctctaccgaataggcacctgg
ctgttggacagcgaggccctgcaccccctgggcatggcgctcacgtccagctga
DBGET
integrated database retrieval system