Tupaia chinensis (Chinese tree shrew): 102485460
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Entry
102485460 CDS
T02978
Symbol
SLC6A1
Name
(RefSeq) solute carrier family 6 member 1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup04721
Synaptic vesicle cycle
tup04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
102485460 (SLC6A1)
04721 Synaptic vesicle cycle
102485460 (SLC6A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tup02000
]
102485460 (SLC6A1)
Transporters [BR:
tup02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
102485460 (SLC6A1)
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Ortholog
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
102485460
NCBI-ProteinID:
XP_014444612
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All DBs
Position
Un
AA seq
596 aa
AA seq
DB search
MATNGSKVADGQISTEVSEAPVANDKPKTLVVKVQKKAADLPDRDTWKGRFDFLMSCVGY
AIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWKLAP
MFKGVGLAAAVLSFWLNIYYIVIISWALYYLYNSFTTTLPWKQCDNPWNTDRCFSNYSVV
NTTNMTSAVVEFWERNMHQMTDGLDKPGRGLAITLAIAWILVYFCIWKGVGWTGKVVYFS
ATYPYIMLIILFFRGVTLPGAKEGILFYITPNFRKLSDSEVWLDAATQIFFSYGLGLGSL
IALGSYNSFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMAHVTKRSIADVAASGPGL
AFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEYPRLLRNRRELF
IAAVCIVSYLIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECVSISWFYGVNRFYDN
IQEMVGSRPCIWWKLCWSFFTPIIVAGVFIFSAVQMTPLTMGSYVFPKWGQGVGWLMALS
SMVLIPGYMAYMFLTLKGSLKQRIQVMIQPSEDIVRPENGPEQPQAGSSASKEAYI
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaacggcagcaaggtggccgacgggcagatctccacggaggtcagcgaggcc
ccggtggccaacgacaagcccaaaaccctggtggtcaaggtgcagaagaaggcggccgac
cttcccgatcgggacacatggaagggccgcttcgacttcctcatgtcctgtgtgggctac
gccatcggcctgggcaacgtctggaggttcccctacctgtgcgggaaaaatggcggcggg
gccttcctgatcccctacttcctgacgctcatcttcgcgggggtcccgctcttcctgctg
gagtgctccctgggccagtacacgtccatcggaggtctgggggtgtggaagctggccccc
atgttcaagggtgtgggcctcgcggccgccgtgctatccttctggctgaacatctactac
atcgtcatcatctcctgggccctctactacctgtataactccttcaccacgacactgccg
tggaaacagtgtgacaacccctggaacaccgaccgctgcttctccaactacagcgtcgtc
aacaccaccaacatgaccagcgccgtggtggagttctgggagcgtaacatgcaccagatg
acggacgggctggataagccggggcgggggctggccatcaccctggccatcgcctggatc
ctcgtgtatttctgtatctggaaaggggtcggctggactgggaaggtggtctacttctcg
gccacgtacccctacatcatgttgatcatcctgttcttccgcggggtcaccctgcccggg
gccaaggaaggcatcctcttctacatcacgcccaacttccgcaagctgtcggactctgag
gtgtggctggacgcggctacccagatcttcttctcctacgggctgggcttggggtccctg
atcgctcttgggagctacaactctttccacaataacgtctacagggactccatcatagtc
tgctgcatcaattcgtgcaccagcatgtttgcagggttcgtcatcttctccatcgtgggc
ttcatggcccatgtcaccaagaggtccatcgctgatgtggcagcctcaggccccgggctg
gcgttcctggcatacccggaggccgtgacccagctgcccatctctcctctctgggccatc
ctcttcttctccatgctgctgatgttgggcattgacagccagttctgcaccgtggagggc
ttcatcacggccctggtggacgagtaccccaggctcctccgcaaccgcagggagctcttc
atcgctgctgtctgcatcgtgtcctacctgattggcctctccaacatcacccagggtggc
atttatgtcttcaaacttttcgactactactcggccagcggcatgagcctgctgttcctc
gtgttctttgaatgtgtttctatctcctggttttacggcgtcaaccgattctacgacaat
atccaagaaatggtgggctccaggccctgcatctggtggaaactctgctggtccttcttc
acccccattatcgtggcgggcgtgttcatcttcagtgctgtgcagatgacccctctcacc
atgggcagctacgtcttccccaagtggggccagggcgtgggctggctcatggctctgtcc
tccatggtcctcatccccgggtacatggcctacatgttcctcaccctgaagggctcgctg
aagcagcgcatccaggttatgatccagcccagcgaggacatcgttcgcccggagaacggt
ccggagcagccccaggccggcagctcggccagcaaagaggcctacatctag
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