Tupaia chinensis (Chinese tree shrew): 102496135
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Entry
102496135 CDS
T02978
Symbol
PRDM9
Name
(RefSeq) PR/SET domain 9
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup00310
Lysine degradation
tup01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102496135 (PRDM9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tup03000
]
102496135 (PRDM9)
03036 Chromosome and associated proteins [BR:
tup03036
]
102496135 (PRDM9)
Enzymes [BR:
tup01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
102496135 (PRDM9)
Transcription factors [BR:
tup03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
102496135 (PRDM9)
Chromosome and associated proteins [BR:
tup03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
102496135 (PRDM9)
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
102496135 (PRDM9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
PRDM2_PR
zf-C2H2
zf-C2H2_4
SSXRD
zf-C2H2_5
zf-C2H2_6
KRAB
SET
Zn-ribbon_8
Zip
Zn_ribbon_SprT
Motif
Other DBs
NCBI-GeneID:
102496135
NCBI-ProteinID:
XP_014445586
LinkDB
All DBs
Position
Un
AA seq
737 aa
AA seq
DB search
MWMPGAPSIMRRYKSPEESPEGDAGRTEWKPTVKDAFKDISVYFSKEEWAQMGEWEKIRY
RNVKRNYTTLIAIGLRAPRPAFMCHRKLAVKPHMDDAEDSDEEWTPRQQVKHPRVTLRVE
EKKYQKELSGAVNLLNTSNSEKDQKPAFPPGETTTSGQLSRQTLEVRRKETKVKMYSLRE
RKCGTYKEVHEPQDDDYLYCEKCQNFFIDSCSAHGPPIFVKDSAVDKGSLNRSVLSLPPG
LRIAPSGIPEAGLGVWNAATDLPLGLHFGPYEGQITEDEEAANSGYSWLITKGRNCYEYV
DGKDESWANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELLVWYGEEYGQEL
GIKWGSKWKKELVARRAEPRPEIHPCLSCSLAFSSQKFLNQHVEHNHSCQRSLRTSARKH
LQPEHTHPGNENQEQHHSDPQHCSDKADYEKVKERSKPSQERTRQRTMSRTFCSPCKGQM
ENAREGERMTGQRTDQKVGAEDTGKLLVRVGSSRIAGVKYGECGQGLINKSNAGRHQRTH
TGEKPYVCRECGRGFSQQSHLIIHQRTHTGEKPYVCRECGRGFSRQSHLIIHQRTHTGEK
PYVCRECGRGFSRQSHLIIHQRTHTGEKPYVCRECGRGFSRQSHLIIHQRTHTGEKPYVC
RECGRGFSRQSHLIIHQRTHTGEKPYVCRECGRGFSQQSNLITHQRTHTGEKPXVCRKGP
VTDKPMITPDPLPAPKL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtggatgcctggtgctcccagcattatgaggcgctacaagtccccagaggagagccct
gaaggagatgcagggaggacagagtggaagcccacggtcaaagacgctttcaaagacatt
tccgtatacttctccaaggaagaatgggcacaaatgggagagtgggagaaaatccgctat
aggaatgtcaaaaggaactataccacactgattgctataggtctcagagcccctcgacca
gcttttatgtgtcaccgaaagctggcggtcaaacctcacatggatgatgctgaggattct
gatgaagaatggacacctaggcagcaagtcaaacatcctcgggtcaccctcagagtagaa
gagaagaaataccagaaggaactgtcaggagcggtaaatttattgaacacaagcaactca
gagaaggaccagaaaccagcatttcctcctggagaaacaaccacctctggacagctctct
agacagacattggaagttaggagaaaggagaccaaagtaaagatgtatagcctgcgagaa
agaaagtgtggtacatacaaagaggtccacgagccccaggatgatgactacttgtattgt
gagaagtgtcagaacttcttcattgacagctgttctgctcatgggcccccaatattcgta
aaggacagtgcagtggacaaggggagtctcaaccgctcagtcctcagtctaccccctggg
ctgagaattgcaccatcaggcatccctgaggctgggcttggagtctggaatgcagcaact
gatctgcccttgggtctgcactttggtccctatgagggacagatcacagaagatgaagag
gcagccaacagtggctactcctggctgatcaccaaggggagaaactgttatgagtatgtg
gatggaaaggatgaatcttgggccaactggatgaggtatgtaaactgtgcccgggatgac
gaggagcagaacctggtggcctttcagtaccacagacagatcttctaccggacctgtcgg
gtcatcaggccaggctgtgagctgctggtgtggtatggggaggagtacggccaggagctg
ggcatcaagtggggcagcaagtggaagaaagagcttgtggcaaggagagcagaaccacga
ccagagatccatccatgtctctcatgctctctggccttctccagtcagaaattcctcaat
caacatgtggaacacaatcactcctgtcagaggtccctgagaacatctgcaagaaaacac
ctccaaccagagcatacccatccggggaatgagaaccaggagcagcatcattctgatcca
cagcactgcagtgacaaagctgattatgaaaaggttaaagaaaggtccaaaccctcccaa
gaaaggacaaggcagaggacaatgtctaggaccttttgcagcccatgcaaaggacaaatg
gagaatgctagagagggtgagagaatgacagggcaaagaacagaccagaaagtaggtgct
gaggacacaggtaaattacttgtgagagtaggaagctcaagaattgccggtgtcaagtat
ggagagtgtgggcaaggcctcatcaataagtcaaatgccggtagacaccagaggacacac
acaggggagaagccctatgtctgcagggagtgtgggcggggctttagccagcagtcacac
ctcatcattcaccagaggacacacacaggggagaagccctatgtctgcagggagtgtggg
cggggctttagccgtcagtcacatctcatcattcaccagaggacacacacaggggagaag
ccctatgtctgcagggagtgtgggcggggctttagccgtcagtcacatctcatcattcac
cagaggacacacacaggggagaagccctatgtctgcagggagtgtgggcggggctttagc
cgtcagtcacatctcatcattcaccagaggacacacacaggggagaagccctatgtctgc
agggagtgtgggcggggctttagccgtcagtcacatctcatcattcaccagaggacacac
acaggggagaagccctatgtctgcagggagtgtgggcggggctttagccagcagtcaaac
ctcatcactcaccagaggacacacacaggggagaagccctaggtttgcaggaagggtcct
gtcacagacaaacccatgatcacaccagaccctcttccagccccaaagctctga
DBGET
integrated database retrieval system
