KEGG   Tupaia chinensis (Chinese tree shrew): 102502264Help
Entry
102502264         CDS       T02978                                 

Gene name
SETDB1
Definition
(RefSeq) SET domain bifurcated 1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup00310  Lysine degradation
tup04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:tup00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    102502264 (SETDB1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    102502264 (SETDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tup03036]
    102502264 (SETDB1)
Enzymes [BR:tup01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     102502264 (SETDB1)
Chromosome and associated proteins [BR:tup03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     102502264 (SETDB1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    102502264 (SETDB1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET DUF5604 Tudor_4 TUDOR_5 Pre-SET MBD DUF4537 Chromo
Motif
Other DBs
NCBI-GeneID: 102502264
NCBI-ProteinID: XP_014439641
LinkDB All DBs
Position
Un
AA seq 1293 aa AA seqDB search
MSSLPGCIGLDAATAAVESEEIAELQQAVVEELGISMEELRQFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASRPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPVEPLQPTALPAPPAPPLSPQAGDNESLESQLA
QSRKQVAKKSTSFRPGSVGSGHSSPTSPALSESVPAGKPGLAQTYRSPLGSTASTPAPPA
TPAPPALPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRSEQYRGKN
PLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMF
CLDPYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVF
INTGPEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYKRLEECLPTGV
YECNKRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILT
DDFADKEGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSGTEDP
EESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSETASKDSRPPDLGPPHIP
GPPSIPVGGCNPPSSEETPKNKVASWLSCNSVSEGGFADSDSRSSFKTSEGGDGRPGGGR
GETEKASTSGLGIKDEGDIKQTKKEDPDDRNKMSVVTEISRNYGYNPSPVKPEGLRRPPS
KTVMHQSRRLLASAQSTTDDVLTLSSSTESEGESGTSRKPTAGQTSATAVDSDDIQTISS
GSEGDDFEDKKNMSGPMKRQVAVKSTRGFALKSTHGIAIKSTNMASVDKGESAPVRKNTR
QFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAG
TELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq 3882 nt NT seq  +upstreamnt  +downstreamnt
atgtcctctcttcctggatgtattggtttggatgcagcaacagctgcagtagagtccgaa
gagattgcagagctgcaacaggcagtggttgaggagcttggtatctctatggaggagctt
cggcagttcattgatgaagaactggaaaaaatggactgtgtacagcagcgcaagaagcag
ctagcagaattggagacctgggtaatacagaaagaatcggaggtggctcatgttgaccag
ctctttgatgatgcatccagggcagtgactaattgtgagtctttggtgaaggacttctac
tccaagctgggactgcaataccgggacagtagctctgaggatgaagcttcccggcctaca
gaaataattgagattcctgatgaagatgatgatgtcctcagtattgattcaggtgatgcc
gggagcagaactccaaaagaccagaagctccgtgaagctatggctgctttaagaaaatca
gcgcaagatgtccagaaattcatggatgctgtcaataagaagagcagttcccaggatcta
cataaaggaaccttgagtcagatgtctggagaattgagcaaagatggtgacctgatagtc
agcatgaggattctgggcaagaagagaactaagacgtggcataaaggcacccttattgcc
atccagacagttgggccagggaagaagtacaaggtgaaatttgacaacaaagggaagagt
ctgctgtcaggaaaccatattgcctatgattaccaccctcctgctgacaagctgtatgtg
ggcagtcgagtggtagccaagtacaaagacgggaaccaggtctggctctatgctggcatt
gtagctgagactccaaacgtgaaaaacaagctcaggtttctcattttctttgatgatggc
tatgcttcctatgtcacgcagtctgaactgtacccaatttgccgaccactgaaaaagacg
tgggaggacatagaagacatctcctgccgagacttcatagaggagtatatcaccgcctac
cccaaccgccccatggtgctgctcaagagcggccagctcatcaagaccgaatgggaaggc
acgtggtggaagtcgcgagttgaggaggtggacggcagcctagtcaggatcctcttcctg
gatgacaaaagatgtgagtggatctatcgaggctctacccggctggagcccatgttcagc
atgaagacgtcctcagcctctgctctggagaagaagcaagggggacagctcaggacacgt
ccaaatatgggtgctgtgaggagcaaaggccctgttgttcagtacacgcaggacctgacc
agtactgggacccagttcaaaccagtggagcccctgcagcctacagctctgcctgctcca
cctgccccacctctgtccccacaagcaggtgacaatgaaagcttggaaagccaacttgcc
cagtcacggaagcaggtagccaaaaagagcacatccttccgaccaggatccgtgggctct
ggtcactcctcccctacatctcctgcactcagcgaaagtgtccctgctgggaaacctgga
ctggcccagacgtacagatcacctttaggctcaacagcctctactccagcacccccagca
accccagcccctcctgcactgccagcacccccagccttccatggtatgctggaacgggcc
ccggcagagccctcctaccgtgcccccatggagaagcttttctacttacctcacgtctgc
agttatacctgtctgtctcgagtcagacctatgaggagtgagcagtaccggggcaagaac
cctctgctagtcccgctgctatatgacttccggcggatgacagcccgccgccgagtgaac
cgcaaaatgggctttcatgttatctataagacaccttgtggcctctgccttcggacaatg
caagaaatcgaacgctacctttttgaaactggctgtgattttctttttctggagatgttc
tgtttggatccatatgttcttgtagatcggaagtttcagccctataagcctttttactat
attttggacattacctatggaaaggaagatgttcccctatcctgtgttaatgagattgac
acaacccccccaccccaggtggcctacagtaaagaacggatcccgggcaagggtgttttc
attaacacaggccctgaatttctggttggctgtgactgcaaggatgggtgtcgggacaag
tccaagtgtgcctgccatcagctcactatccaggccacagcctgcaccccagggggccag
atcaaccctaactctggctaccagtacaagagactagaagagtgtctgcccacaggggta
tatgagtgtaacaagcggtgcaaatgcgacccaaacatgtgcacgaaccggttggtgcag
cacggactgcaggttcggctccagctattcaagacccagaacaagggctgggggatccgc
tgtttagatgacattgccaaaggctctttcgtttgtatttatgcaggcaaaatcctgaca
gatgactttgcagacaaggaaggccttgaaatgggtgatgagtactttgcaaatctggac
catatcgagagtgtggagaacttcaaggaaggatatgagagtgatgccccctgttcttct
gacagcagtggggtagacttgaaggaccaagaagatggcaacagtggcacggaggaccct
gaagagtccaatgacgatagctcggacgataacttctgtaaggacgaggacttcagcacc
agctcagtatggcgcagctacgctacccggaggcagactcggggccagaaggagaatgga
ctttctgagacagcttccaaggattcccgccccccggacctcgggcccccacatattcct
ggccctccctctatccctgtaggtggttgtaatccaccttcctccgaagagacacccaag
aacaaggtggcctcatggttgagctgcaacagtgtcagtgaaggtggttttgcagactct
gatagccgttcatcctttaagactagcgaaggtggagatggccggcctgggggagggcga
ggggagacagagaaggcctctacctcaggactgggcatcaaggatgagggagacatcaag
cagaccaagaaagaggatcctgatgaccgaaacaaaatgtcagtagttactgaaatttct
cgaaattatggctacaatccttctccagtgaagcctgaaggacttcgccgcccacccagt
aaaaccgttatgcatcagagccgacgactcctggcctctgctcagtccaccactgatgat
gtcctgacactgtccagcagcacagaaagtgagggggaaagtgggaccagccgaaagccc
actgctggtcagacttcagccacagcggtggacagtgacgacatccagaccatctcctct
ggctctgaaggggatgactttgaggacaagaagaatatgtctggtccaatgaagcgccaa
gtggcagtcaaatcaacccgaggctttgctcttaagtcaacccatgggatcgccattaaa
tcaaccaacatggcctctgtggacaagggggagagtgcacctgttcgtaagaacacacgc
cagttctacgatggcgaggagtcttgctacatcatcgatgccaagcttgaaggcaacctg
ggccgctacctcaaccacagctgcagccccaacctgtttgtccagaatgtcttcgtggac
actcatgatcttcgcttcccctgggtggccttttttgccagcaagagaatccgggctggg
acagaacttacctgggactacaactacgaggtgggcagtgtggaaggcaaggagctgctc
tgctgctgtggagccatcgaatgcagaggtcgtctcctttag

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