Trametes versicolor: TRAVEDRAFT_172147
Help
Entry
TRAVEDRAFT_172147 CDS
T04795
Name
(RefSeq) nucleotide excision repair TFIIH subunit
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
tvs
Trametes versicolor
Pathway
tvs03022
Basal transcription factors
tvs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TRAVEDRAFT_172147
09124 Replication and repair
03420 Nucleotide excision repair
TRAVEDRAFT_172147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvs03021
]
TRAVEDRAFT_172147
03400 DNA repair and recombination proteins [BR:
tvs03400
]
TRAVEDRAFT_172147
Transcription machinery [BR:
tvs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TRAVEDRAFT_172147
DNA repair and recombination proteins [BR:
tvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TRAVEDRAFT_172147
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb5
Binary_toxB_3
Motif
Other DBs
NCBI-GeneID:
19411289
NCBI-ProteinID:
XP_008041649
JGI:
172147
LinkDB
All DBs
Position
Unknown
AA seq
64 aa
AA seq
DB search
MKAIRGVLLTCDSAVKQILLTLNEKENFIIEDLDDFHVVIKADEEYRVRRELEAELEKNT
YSLE
NT seq
195 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgatacgaggcgtgcttctcacctgtgattcggccgtgaagcagattctgctc
acgctgaatgagaaggagaacttcatcatcgaggatctggatgactttcatgtcgtgatc
aaggccgatgaggagtatcgtgtgagacgcgagctcgaggcggagctcgaaaagaacaca
tacagccttgagtga
DBGET
integrated database retrieval system
