Trametes versicolor: TRAVEDRAFT_69754
Help
Entry
TRAVEDRAFT_69754 CDS
T04795
Name
(RefSeq) beta and beta-prime subunits of DNA dependent RNA-polymerase
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
tvs
Trametes versicolor
Pathway
tvs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TRAVEDRAFT_69754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvs03021
]
TRAVEDRAFT_69754
Enzymes [BR:
tvs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TRAVEDRAFT_69754
Transcription machinery [BR:
tvs03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
TRAVEDRAFT_69754
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
Motif
Other DBs
NCBI-GeneID:
19419203
NCBI-ProteinID:
XP_008035382
JGI:
69754
LinkDB
All DBs
Position
Unknown
AA seq
1231 aa
AA seq
DB search
MPDGSPRLRPRDKCTFDTLAREKKFKSPPEKESVIPILNEFVTPHIESFNALFDDSGLPS
GDGDGRGLLHLGLEDIGKRVVFDGRGDIGTESGQRGWGNRLSMWYEQVTVSKPMVSERDT
QAKERRVYPSEARERLTSYRGRMMVKICWQVNDGPVEVEMRDCGLLPIMVRSTRCNLRGM
SSGELVRHHEEPEEFGGYFVINGNERLIRYLILPRRHHVISLVRPSFVNRGPSYTPYAVQ
IRCVRPDQTSATNTLHYLSNGSAMLRFSWRKQEYVIPIMLILKALVSASDKEVFEGVMMQ
DYGDTFLSDRVELLLRSFKMYHLYTGDQCLQYLGDKFRIVVNMPEDWTNQAIGVWLINKV
VLVHLQNARDKFRMLLFMLRKLYALVSKSCSVDNPDSPQHQEVLLPGALYGMIIKERLEE
ALNGFREGIALDVRNSNPAVDFYDKRYIKKVLQRTSYDIGAKMSNFLATGNLVTPTGLDL
QQASGFTIVAEKLNWMRYISHFRSIHRGAFFAELKTTTVRKLLPEAWGFLCPAHTPDGSP
CGLLNHLSRTCRIVTTPLAVSHIPALLAAHGMTQAFAPSVDGRRNLCVQLDGRLIGWAPA
AVCQQLATSLRIWKTEGKHSVPLDLEIGYVPVSKAGQYPGLYLFASRSRMMRPVKYVPNG
KDDQVGSFEQVYMDIACTPAEIEDGVSSHVEHSPTNFLSILANLTPFSDFNQSPRNIYQC
QMGKQTMGTPATALQHRTDNKLYRLQTGQTPIVRPMLHNTYGMDSFPNGTNAIVAVISYT
GYDMEDAMILNKSAHERGFGYGTVYKSYTVDLQELTGSRRIATTPTLHFGFGPEIRTDGE
KAHPATLHIDSDGLPCVGARLNPGDPIAAYVDDTTGRTKFAKYKGDEVAYVDTVRLIGSD
AGDQELQKINMTLRITRAPVIGDKFSSRHGQKGVCSQKWPAIDMPFSESGMQPDVIINPH
AFPSRMTIGMLVESMAGKAGAMHGLAQDATPFQFTEEDTAIEYFGEQLQAAGYNYYGNEP
MYSGITGQEFAADIYIGVVYYQRLRHMVLDKFQVRTTGPVDPVTRQPVKGRKRAGGIRFG
EMERDALIAHGTAFLLQDRLMNCSDYSTAWVCRTCGSLISLGYDDVSLGEMVIGANGSLK
PTGPGGEYCRACRAAAEEEDTRARQALANGGPARTAANGRSADVRVAIGSQFVLGSASKG
GDMDIIAVPYVFRYLCAELASMGIKISLEVQ
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgggtccccgcgcttgaggccgcgagacaagtgcacatttgacacgcttgcg
cgcgagaagaaattcaagagtccgccggagaaagagtccgtaatacctatcctcaatgag
ttcgtgaccccgcacatagaatccttcaatgcgctcttcgacgactctggtctgccctcg
ggagatggagacggacgcgggctcttgcatctgggcctagaagacattgggaagcgcgtc
gtatttgacgggcgaggagacattggtacggagagtggtcagcggggatggggaaaccga
ctgtcaatgtggtacgagcaggtcaccgtctccaaacctatggtctcggagcgcgacaca
caggctaaggaaaggagagtatatccgtccgaggcccgcgaacgcttgacctcgtaccgt
ggacgtatgatggtgaaaatatgttggcaagtcaacgatggacctgtggaggttgaaatg
agggattgcggtctgctccctatcatggttcggtcaacgcggtgtaaccttcgcggcatg
tcctcgggcgaactcgttagacatcacgaagagccagaagaattcggtggttactttgtc
atcaacggaaacgaacgtctcatccggtatctcattctcccccgacgacatcatgtcatt
tctctggtccggccatccttcgtcaaccgcggaccctcgtacacaccatatgcggtgcaa
atacgctgtgtgcgccccgaccagacaagcgcgacgaacacactccactacttgtcgaac
ggtagcgcgatgctccgtttcagctggcggaaacaggaatatgttattcccatcatgctc
atcctgaaggctctcgtatccgcttccgacaaagaggtcttcgagggtgtcatgatgcag
gactacggagacacattcttgtctgatcgcgtcgagttgctcttgcgaagcttcaagatg
tatcatctctacaccggcgaccaatgtctgcaataccttggcgacaaattccggatagtg
gtcaacatgccggaggactggactaaccaggcgattggtgtatggctgatcaacaaggtc
gtcctcgtccatctacagaacgcccgggacaagttccgcatgctcctattcatgttgcgg
aaactctacgctctggtatcgaagtcgtgcagcgttgacaaccctgattcgccccagcat
caagaagttctgctccctggtgccctgtacggcatgatcatcaaggagcgtttggaagaa
gcattgaacggtttccgcgaaggaatcgccctagatgtccggaacagcaatcctgcggta
gatttttacgacaagcgttacatcaagaaggtgctacagcggacaagctatgacattggt
gccaagatgtcaaacttcctcgcgactggaaacctggtcacacctactggactcgatctc
cagcaggcgtccggtttcaccatcgtcgctgagaagttaaactggatgcgatacatcagt
catttccggtcaattcatcgaggtgcattcttcgctgaactgaagaccaccaccgttcgt
aaattgcttcccgaagcctggggtttcctctgccccgcacacactcctgatggatcgccc
tgtggactgctcaaccatctatcccgaacctgccgcattgtcaccacacctctcgccgta
tctcacatccccgccctcctcgccgcccatggcatgacacaagcgttcgcgccgtcggtt
gatggccgacgtaacctctgcgtacaactcgacggccgactgatcggttgggctcctgct
gcagtatgccaacagctcgccacgagcctacggatatggaagaccgagggcaagcacagt
gtcccgctcgacctcgagatcggatacgtcccggtctccaaggctgggcagtaccctggt
ttgtatctctttgcatcgcgttcgcgcatgatgcggccagtcaagtacgtgccaaatggg
aaagacgaccaggttgggtcctttgagcaggtctacatggatattgcctgtacacccgcg
gagattgaggatggtgtctcaagccatgtagagcactcgcccacgaacttcctatccatc
ttggccaacctcacccctttctcggacttcaaccagagtcctcgtaatatttaccagtgt
cagatgggtaaacaaactatgggaacaccggcgaccgctttgcaacatcgaacagacaac
aagttgtaccgcctacaaaccggtcagacgcctatcgtgcggcctatgctgcacaacaca
tacggcatggactccttccctaacggtacgaacgcgattgtcgccgtcatctcttacacc
ggttacgacatggaggatgccatgatcttgaacaagtccgcgcacgaacgagggttcggg
tacggtaccgtgtacaagtcgtatactgtcgacctgcaagagctcaccggctcccgccgc
atcgcgaccacgcccaccctacacttcggcttcgggcctgaaatccgcacggatggcgag
aaggcgcacccggcaactctacacatagattccgatggtttgccatgtgtgggtgcgagg
ctcaacccgggcgaccccatcgctgcgtatgtcgacgacacgacgggtcgtacgaagttc
gcgaagtacaagggcgacgaagtcgcgtatgttgatactgtgcgcctaatcggcagtgac
gcgggcgaccaggagctgcagaagatcaacatgacactgcgcatcacccgcgcgccggtg
attggagacaagttctcgtcccgacacggacagaaaggtgtctgctcgcagaagtggccc
gcgatcgacatgccattctcggagagtggcatgcagcccgacgtgatcatcaacccgcac
gccttcccgtctcgtatgacgatcggcatgttggtcgagagcatggctggtaaggccggt
gcaatgcacggcctcgcccaagatgcgacaccgttccagttcacggaagaggacaccgcc
atcgagtacttcggtgaacagctccaggccgctggctacaactactacggcaacgaaccc
atgtactccgggatcaccgggcaagagttcgcagcggacatctacatcggcgtcgtctac
taccaacgtctgcggcacatggtgcttgacaagttccaggtgcggacgacgggccccgtc
gaccctgtgacgcgccagcccgtaaagggccgcaaacgcgcaggtggtatccgtttcggc
gagatggagcgcgacgcgctcatcgcgcacggcaccgcgttcctcctccaggatcgcctc
atgaactgttcggactactcgaccgcgtgggtctgcaggacgtgcggtagtctcatctcg
ctcgggtacgacgacgtttcgctcggcgagatggtcatcggcgcgaacggctcgctcaag
cccaccggccctggcggcgagtactgcagggcctgccgcgccgccgcggaggaagaggat
acgcgggcgcggcaggcgctcgccaacggtgggcccgcacgcaccgccgcgaacggacgt
tcagcagacgtgcgcgtcgcgatcggctcgcagttcgtgctcgggtccgcgtcgaagggc
ggtgacatggacatcatcgcggtgccgtacgtcttccgctacctctgtgccgagctggcg
tcgatgggcatcaagatctcgctggaggtgcaatag
DBGET
integrated database retrieval system
