Thermoactinomyces vulgaris: AB849_005800
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Entry
AB849_005800 CDS
T05864
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
tvu
Thermoactinomyces vulgaris
Pathway
tvu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB849_005800 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvu03400
]
AB849_005800 (uvrA)
DNA repair and recombination proteins [BR:
tvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB849_005800 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AB849_005800 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_21
AAA_29
nSTAND1
RsgA_GTPase
AAA_22
DnaJ_CXXCXGXG
nSTAND3
ATPase
DUF4350
NACHT
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
QBK13157
LinkDB
All DBs
Position
1121228..1124107
Genome browser
AA seq
959 aa
AA seq
DB search
MSQEKIVVRGARVHNLKNIDVTIPRDQFVVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDGIDGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARVGHA
YCPVHGIEIKSQTVQQMVDRIMELPERSRIQVLAPVVKGRKGEHVKLLKDISRQGYVRVR
IDGELRDLSEEIKLEKNKKHTIEVVVDRIIVKPGVNTRLTDSVETALAISDGEVLVDVIG
GDELLFSSKLACPECGFSIEELSPRMFSFNSPYGACPACDGLGNRLVIDPQLVIPDPSLS
LNEGAIEPWSSSNGNHYYEQLLKAACDHFQIDMDKPFQDLSQKEKDILLYGSDERFPFRY
VRNSGFEREAMARFDGVVGHLNRRFKETGSDMVREYLETYMTTKSCPSCKGARLKKEILH
IYVGGKNIDEVTRLSIKEALEFFQNLSLSDKENQIAYQVLKEIKSRLGFLVNVGLGYLSL
SRAAGTLSGGEAQRIRLATQIGSKLMGVLYILDEPSIGLHQRDNNRLIATLKEMRDLGNT
LIVVEHDEDTMLACDYIIDIGPGAGAHGGKVVAAGTPQELMENEKSLTGEYLSGRRFIPV
PQKRREPNGKWIKVSGARENNLKNIDVAFPLGVFTCVTGVSGSGKSTLVNEILLKGLARR
LGKAKTVPGKHKKIEGAEHLNKIINIDQSPIGRTPRSNPATYTGVFDDIREVFASTPEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEQCKGKRYNRETLEVKYKG
KSISDVLEMTVEESLDFFANIPRIQRKLQTLYDVGLGYIKLGQPATQLSGGEAQRVKLAS
ELYKRSQGRTLYVLDEPTTGLHIDDIARLLKVLERLVENGDTVVVIEHNLDVIKTADYLI
DLGPEGGSGGGTIVAKGTPEEVAKSKGSYTGQFLAPILERDKKRMETLLAKREETATPK
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagaaaagattgtcgttcgcggtgcacgggtgcataatctgaaaaacattgat
gtgacgattccgcgtgatcagtttgttgtcatcacggggttgagcggttccggaaagtcc
tcacttgcgtttgacaccatttatgccgaagggcaacgtcgttatgtcgaatcgctttcg
gcttatgcccgccagtttttggggcaaatggacaagccggatgtcgatgggattgacggg
ttgtccccggcgatctccatcgaccagaaaacgacgagccgcaatccccgttccacggtc
ggaaccgtgaccgagatttacgattacctgcgcttgctctatgcgcgggtgggacatgct
tattgtccggtgcatggaatcgagattaaatcgcaaaccgttcagcaaatggtggaccgg
atcatggaattgccggagcgttcccggattcaggttttggcaccggtcgtcaaagggcga
aaaggggagcatgtcaagcttttaaaagatatcagccgccaagggtatgtgcgtgtccgg
attgacggggaactccgggatttgtccgaagagatcaaactggagaaaaacaaaaagcat
accatcgaagtggtggtggaccggatcatcgtcaaaccgggcgtgaacacgcggcttacg
gattccgtcgagaccgctctggcaatcagtgacggtgaagtgttggtcgatgtgatcggc
ggggacgagttgttgttcagttccaagctggcttgtccggagtgcggcttcagcattgag
gaattgtctccgcgcatgttctcttttaacagcccgtacggcgcttgtccggcttgtgac
ggactgggaaaccggttggtgatcgacccgcagctggtgattcccgatccgtccctttcc
ctgaatgaaggagcgattgaaccctggtcttcttccaacggcaatcattattacgagcaa
ctgttgaaagccgcttgcgaccatttccaaattgacatggataagccgtttcaggattta
agccaaaaggaaaaggatattctcctttacggttccgatgaacggtttcctttcagatat
gtgagaaacagcggttttgaacgggaagccatggcccggtttgacggggtggtgggacat
ttgaaccgccgttttaaagaaaccggttccgacatggtgcgcgagtatttggaaacgtat
atgacaaccaagtcttgcccttcctgcaagggggcccgcctgaaaaaagagattcttcat
atctacgtcggcggaaaaaacatcgatgaggtcactcgtctttcgatcaaagaggcactg
gaatttttccaaaacctgtctttgtcggacaaggaaaaccaaatcgcttatcaagtgtta
aaagaaattaaaagccggctcggttttttggtcaatgtgggactcggttatctgagtttg
tcccgcgcggccgggacgttgtcgggaggagaagcgcaacggattcgcctggcgacccag
atcggttccaaattgatgggggttttgtatattctggatgagccgagcatcggcctccat
cagagagataacaaccgcttgattgccaccctcaaggagatgagggatttggggaatacc
ctgattgtggtggagcatgatgaagacacgatgttggcttgcgattacatcatcgatatc
ggtcccggtgccggagcccacgggggaaaagtggttgctgccggcacgccgcaggaattg
atggaaaatgaaaaatcgttgacaggggaatacttaagcggccgccgtttcattcccgtg
ccacagaagcggagagagccgaacggcaaatggatcaaagtgtcgggagcacgggaaaat
aacttgaaaaatatcgatgttgcctttcctctcggcgtattcacctgtgtgacgggcgtt
tccggttcgggaaaaagtacactggttaatgaaattttgttaaaaggtttggcgcgccgg
ttgggcaaagccaaaacggtgcccggcaagcacaaaaaaatcgaaggcgccgaacattta
aataaaatcattaacatcgaccaatctccgatcgggagaacaccgcgttccaatcctgca
acgtacaccggggtgtttgatgatatccgcgaagtgtttgcatccacgccggaagccaag
gtgagaggctacaagaaagggcgtttcagtttcaatgtcaaaggcggacggtgcgaggcc
tgccgcggggacggtattattaaaattgaaatgcattttctgccggatgtttatgtaccg
tgtgaacaatgcaaagggaaacggtataaccgggaaaccttggaagtgaaatacaaagga
aaaagcatttcggatgtcttggaaatgacggtggaggaatccttggatttctttgcgaat
attccccggatccaacggaaattgcaaaccctttatgacgtggggctggggtatatcaaa
ctgggacagccggccacgcaattgtccgggggggaagcccaacgggtgaaattggcttcg
gagttgtataaacggagtcaagggcggacgttatatgtgctggatgaacccaccaccggt
cttcacatcgatgatatcgcgcggttgctcaaagtgttggagcggctggtggaaaacggg
gacacggtggtcgtcattgagcataatctggatgtgattaaaacagcggactatctgatt
gacctgggaccggaaggcggaagcggcgggggaacgatcgttgccaaaggaacaccggaa
gaagtggccaagagcaaaggatcttataccggacaattcctggcgccgattttggaaaga
gacaaaaaacgcatggaaaccctgctggcaaaacgggaagagaccgcaaccccaaagtaa
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