KEGG   Thermoactinomyces vulgaris: AB849_005800
Entry
AB849_005800      CDS       T05864                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
tvu  Thermoactinomyces vulgaris
Pathway
tvu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tvu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AB849_005800 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tvu03400]
    AB849_005800 (uvrA)
DNA repair and recombination proteins [BR:tvu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AB849_005800 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AB849_005800 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_21 AAA_29 nSTAND1 RsgA_GTPase AAA_22 DnaJ_CXXCXGXG nSTAND3 ATPase DUF4350 NACHT Viral_helicase1 cobW
Other DBs
NCBI-ProteinID: QBK13157
LinkDB
Position
1121228..1124107
AA seq 959 aa
MSQEKIVVRGARVHNLKNIDVTIPRDQFVVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDGIDGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARVGHA
YCPVHGIEIKSQTVQQMVDRIMELPERSRIQVLAPVVKGRKGEHVKLLKDISRQGYVRVR
IDGELRDLSEEIKLEKNKKHTIEVVVDRIIVKPGVNTRLTDSVETALAISDGEVLVDVIG
GDELLFSSKLACPECGFSIEELSPRMFSFNSPYGACPACDGLGNRLVIDPQLVIPDPSLS
LNEGAIEPWSSSNGNHYYEQLLKAACDHFQIDMDKPFQDLSQKEKDILLYGSDERFPFRY
VRNSGFEREAMARFDGVVGHLNRRFKETGSDMVREYLETYMTTKSCPSCKGARLKKEILH
IYVGGKNIDEVTRLSIKEALEFFQNLSLSDKENQIAYQVLKEIKSRLGFLVNVGLGYLSL
SRAAGTLSGGEAQRIRLATQIGSKLMGVLYILDEPSIGLHQRDNNRLIATLKEMRDLGNT
LIVVEHDEDTMLACDYIIDIGPGAGAHGGKVVAAGTPQELMENEKSLTGEYLSGRRFIPV
PQKRREPNGKWIKVSGARENNLKNIDVAFPLGVFTCVTGVSGSGKSTLVNEILLKGLARR
LGKAKTVPGKHKKIEGAEHLNKIINIDQSPIGRTPRSNPATYTGVFDDIREVFASTPEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEQCKGKRYNRETLEVKYKG
KSISDVLEMTVEESLDFFANIPRIQRKLQTLYDVGLGYIKLGQPATQLSGGEAQRVKLAS
ELYKRSQGRTLYVLDEPTTGLHIDDIARLLKVLERLVENGDTVVVIEHNLDVIKTADYLI
DLGPEGGSGGGTIVAKGTPEEVAKSKGSYTGQFLAPILERDKKRMETLLAKREETATPK
NT seq 2880 nt   +upstreamnt  +downstreamnt
atgtcgcaagaaaagattgtcgttcgcggtgcacgggtgcataatctgaaaaacattgat
gtgacgattccgcgtgatcagtttgttgtcatcacggggttgagcggttccggaaagtcc
tcacttgcgtttgacaccatttatgccgaagggcaacgtcgttatgtcgaatcgctttcg
gcttatgcccgccagtttttggggcaaatggacaagccggatgtcgatgggattgacggg
ttgtccccggcgatctccatcgaccagaaaacgacgagccgcaatccccgttccacggtc
ggaaccgtgaccgagatttacgattacctgcgcttgctctatgcgcgggtgggacatgct
tattgtccggtgcatggaatcgagattaaatcgcaaaccgttcagcaaatggtggaccgg
atcatggaattgccggagcgttcccggattcaggttttggcaccggtcgtcaaagggcga
aaaggggagcatgtcaagcttttaaaagatatcagccgccaagggtatgtgcgtgtccgg
attgacggggaactccgggatttgtccgaagagatcaaactggagaaaaacaaaaagcat
accatcgaagtggtggtggaccggatcatcgtcaaaccgggcgtgaacacgcggcttacg
gattccgtcgagaccgctctggcaatcagtgacggtgaagtgttggtcgatgtgatcggc
ggggacgagttgttgttcagttccaagctggcttgtccggagtgcggcttcagcattgag
gaattgtctccgcgcatgttctcttttaacagcccgtacggcgcttgtccggcttgtgac
ggactgggaaaccggttggtgatcgacccgcagctggtgattcccgatccgtccctttcc
ctgaatgaaggagcgattgaaccctggtcttcttccaacggcaatcattattacgagcaa
ctgttgaaagccgcttgcgaccatttccaaattgacatggataagccgtttcaggattta
agccaaaaggaaaaggatattctcctttacggttccgatgaacggtttcctttcagatat
gtgagaaacagcggttttgaacgggaagccatggcccggtttgacggggtggtgggacat
ttgaaccgccgttttaaagaaaccggttccgacatggtgcgcgagtatttggaaacgtat
atgacaaccaagtcttgcccttcctgcaagggggcccgcctgaaaaaagagattcttcat
atctacgtcggcggaaaaaacatcgatgaggtcactcgtctttcgatcaaagaggcactg
gaatttttccaaaacctgtctttgtcggacaaggaaaaccaaatcgcttatcaagtgtta
aaagaaattaaaagccggctcggttttttggtcaatgtgggactcggttatctgagtttg
tcccgcgcggccgggacgttgtcgggaggagaagcgcaacggattcgcctggcgacccag
atcggttccaaattgatgggggttttgtatattctggatgagccgagcatcggcctccat
cagagagataacaaccgcttgattgccaccctcaaggagatgagggatttggggaatacc
ctgattgtggtggagcatgatgaagacacgatgttggcttgcgattacatcatcgatatc
ggtcccggtgccggagcccacgggggaaaagtggttgctgccggcacgccgcaggaattg
atggaaaatgaaaaatcgttgacaggggaatacttaagcggccgccgtttcattcccgtg
ccacagaagcggagagagccgaacggcaaatggatcaaagtgtcgggagcacgggaaaat
aacttgaaaaatatcgatgttgcctttcctctcggcgtattcacctgtgtgacgggcgtt
tccggttcgggaaaaagtacactggttaatgaaattttgttaaaaggtttggcgcgccgg
ttgggcaaagccaaaacggtgcccggcaagcacaaaaaaatcgaaggcgccgaacattta
aataaaatcattaacatcgaccaatctccgatcgggagaacaccgcgttccaatcctgca
acgtacaccggggtgtttgatgatatccgcgaagtgtttgcatccacgccggaagccaag
gtgagaggctacaagaaagggcgtttcagtttcaatgtcaaaggcggacggtgcgaggcc
tgccgcggggacggtattattaaaattgaaatgcattttctgccggatgtttatgtaccg
tgtgaacaatgcaaagggaaacggtataaccgggaaaccttggaagtgaaatacaaagga
aaaagcatttcggatgtcttggaaatgacggtggaggaatccttggatttctttgcgaat
attccccggatccaacggaaattgcaaaccctttatgacgtggggctggggtatatcaaa
ctgggacagccggccacgcaattgtccgggggggaagcccaacgggtgaaattggcttcg
gagttgtataaacggagtcaagggcggacgttatatgtgctggatgaacccaccaccggt
cttcacatcgatgatatcgcgcggttgctcaaagtgttggagcggctggtggaaaacggg
gacacggtggtcgtcattgagcataatctggatgtgattaaaacagcggactatctgatt
gacctgggaccggaaggcggaagcggcgggggaacgatcgttgccaaaggaacaccggaa
gaagtggccaagagcaaaggatcttataccggacaattcctggcgccgattttggaaaga
gacaaaaaacgcatggaaaccctgctggcaaaacgggaagagaccgcaaccccaaagtaa

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