Tropheryma whipplei Twist: TWT_296
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Entry
TWT_296 CDS
T00116
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
twh
Tropheryma whipplei Twist
Pathway
twh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
twh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TWT_296 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twh03400
]
TWT_296 (uvrA)
DNA repair and recombination proteins [BR:
twh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TWT_296 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TWT_296 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
SMC_N
UvrA_DNA-bind
AAA_29
AAA_16
AAA_21
nSTAND1
RsgA_GTPase
AAA_22
AAA_23
nSTAND3
AAA_33
AAA_18
Viral_helicase1
AAA_14
cobW
NACHT
T2SSE
RNA12
RNA_helicase
Septin
NTPase_1
FtsK_SpoIIIE
RNase_E_G_Thio
SLFN-g3_helicase
Herpes_Helicase
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AAO44393
UniProt:
Q83MY7
LinkDB
All DBs
Position
380362..383208
Genome browser
AA seq
948 aa
AA seq
DB search
MSSRRSFLRVKNARVHNLKNLNVRIPRNSMTVFTGLSGSGKSSLAFDTIFAEGQRRYIES
LSAYARQFLERLDRPEVDSIDGLSPSVAIDQKTTSRNPRSTVGTVTEIFDYLRLLWARVG
VLHCPECDLPVQKQTIQQIVDSIAKIPHGERFMLLSPLVRQKKGEFVDLFSRLTTSGFSR
VVVDEEIYLLTEVPKLKKNSRHTIKVVVDRLVSEDNMLTRLTDSIETAFGLSNICEVQTF
KGDVFRFSINSACPNLHFLNFDKIEPRTFSFNSPVGACPDCDGIGTVRSVNMTTLVPDIQ
LSVEKIALDLIGKKIVSKNFMREISALARNLKFTLNTPWSDLTDYVQNTILHAKNFLLHN
TRVRYYTGLVRKIERDVSENSGGSLSGYLYNSPCRSCSGKRLRASSLCVKVSNKNIIDVC
DMPLDGILHFFKALDIPRKFEKISSPILREIISRLEFLIELGLGYLTLSRSITTISGGES
QRIRLATQIGSGLTEVLYVLDEPSIGLHKRDNEKLIKLLLNLRNRGNTLIVVEHDEETIR
SSDWIVDIGPGAGRMGGQVVYSGPVGKMPSRSLTGKYLSGELMVSTPKKRRVSSCGITLS
GAKENNLKNITVFFPLKTFIVITGVSGSGKSTLVNSVLCKALSNICKGNTPSENNCQDAD
CTDACTVRNGMQHNEQTVRLAPALDGAENISKVVHIDQKPIGRTPRSNLATYTGVFDKIR
DIFSKTPTARARGYSPGRFSFNLKGGRCEKCKGDGCIKVEMNFLPDVYVDCEDCNGMRYN
RDTLQVLYNNMSIHDVLTMPVCEAVEFFRAIPSIHQPLKLMDEIGLGYMTLGQPAPTLSG
GEAQRIKLAAQLQKRTAQDVLYVLDEPTTGLHFHDVRQLLEILHRLVDNGNTVIVIEHNL
DVIKTADHVIDMGPEGGNAGGSVVACGTPEEVALHPDSATGYFLKKCL
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaagtcgcaggtcatttttgcgcgttaaaaacgcgcgggttcacaatttaaaaaac
cttaatgtgcggattccgagaaattcaatgactgtttttacaggcctttccggctccgga
aagtcaagtcttgcatttgacactatttttgctgaggggcagaggcggtacatagagtct
ctttctgcatatgcaagacagtttttagaaagacttgataggccggaggtggattctatc
gacggactcagcccatcagtggcgattgaccaaaaaaccacaagtagaaatccgcgctct
accgtcggtacggtcacggaaatatttgattatttgcggcttctgtgggcgcgtgttggg
gttttgcactgtccggaatgtgatttacccgtacaaaaacagactattcagcagatagta
gattcaattgccaagattccacacggtgaaagattcatgctcttatcaccacttgtacga
caaaaaaagggggaatttgttgatcttttctcgaggcttaccacatctggtttttcgcga
gttgttgttgatgaagaaatttatttactaacagaagttccgaaacttaaaaaaaattcg
cgccacacaataaaagttgttgtagataggcttgtttctgaggacaatatgctaactcgg
ttaacagattcaattgaaaccgcatttggcctttcgaatatttgtgaagttcaaaccttc
aaaggtgatgtatttcgcttttctataaactcagcatgcccgaatttacactttctgaac
tttgacaaaatagagccgagaaccttctcgtttaattcacctgtcggcgcatgtcccgac
tgtgacgggatcggcacagttcgatctgtcaatatgaccacattagtgcctgatatacag
ctttcagttgagaagatagcgctagaccttataggtaaaaaaattgtttcaaaaaacttc
atgcgcgagatatcagcccttgctaggaatcttaaattcaccctcaataccccgtggagt
gatcttacagattacgtacaaaacacaatactgcacgcaaaaaattttctattacacaac
actagagtgcggtattacacgggtcttgtaagaaagatagaaagggatgtatcagaaaac
tctggaggatctctttcgggttatttatacaactcaccgtgtcgttcgtgctctggaaag
cgccttagggcatcgtcactctgcgtcaaagtgtctaacaaaaatattattgatgtttgt
gatatgcctcttgacggaatactccacttttttaaagcattggatattccaagaaaattt
gagaaaatatcctctccaatactcagagaaattatctcaagactggagtttctgattgaa
ctcggtcttgggtatttaactttgtcacgaagtattacaacaatttctggaggtgagtcc
caaagaataagattggcaactcaaatcggctcaggtctcacggaggtgctttatgttctg
gacgaaccgagcattggtctacacaagagagataacgagaagcttataaagctattgctg
aatcttaggaaccgcgggaatacgcttatcgttgttgagcatgatgaagagacgattaga
tcttcggattggatagttgatatagggcctggtgcggggagaatgggcgggcaggtcgtt
tattctggtccagtcggtaaaatgcccagtcgtagtcttacaggaaaatacctctcgggt
gaacttatggtctctacaccgaagaagcgccgagtttcttcgtgtggaattaccctctcg
ggtgcaaaagaaaataatctaaaaaatataacggttttctttccattaaaaacctttata
gtcattacaggtgtttctggctctgggaaatcaaccttagtaaactctgttttgtgcaaa
gcgctctcgaatatttgcaaggggaatacgccttccgagaataattgtcaggatgcagat
tgtactgatgcttgtacggtacgcaatgggatgcagcacaatgaacagactgttcgtttg
gcacctgcactggatggtgcggagaatatctcaaaagttgttcatatagaccagaagcct
atcggacgaactccgaggtcaaatttggcgacttataccggggtgtttgacaaaataagg
gatattttttctaaaacaccaacagctcgtgcgagggggtattcaccaggtcgatttagt
tttaatctcaaaggtggacgatgtgaaaaatgtaagggtgatggatgcataaaggttgaa
atgaattttttgcccgatgtttatgtggattgcgaggattgcaatggaatgcggtacaac
agagacacgctccaggttctctacaacaatatgagtatacatgatgtattaacaatgccg
gtttgtgaagctgttgagttttttagggctattccatctatacatcaaccattgaaactc
atggatgaaatagggctcggctacatgactttaggtcaacccgcgcccacactgtccggt
ggggaagctcaaaggataaagcttgccgcgcaacttcaaaaacgcactgcacaggatgtt
ctgtatgttctggatgaaccaacaaccgggttacattttcatgatgttaggcagttgctt
gagatacttcatagactggttgataacggcaacacagttatcgtaattgagcataatctg
gatgttataaaaacagcagaccacgtaatagatatgggccctgaagggggtaatgctggt
gggtcagtggttgcttgcggtacaccagaagaagttgcactccatcccgacagtgcaaca
ggttatttccttaaaaaatgcttgtga
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