Tropheryma whipplei TW08/27: TW002
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Entry
TW002 CDS
T00117
Symbol
dnaN
Name
(GenBank) DNA polymerase III, beta chain
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
tws
Tropheryma whipplei TW08/27
Pathway
tws03030
DNA replication
tws03430
Mismatch repair
tws03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tws00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TW002 (dnaN)
03430 Mismatch repair
TW002 (dnaN)
03440 Homologous recombination
TW002 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tws03032
]
TW002 (dnaN)
03400 DNA repair and recombination proteins [BR:
tws03400
]
TW002 (dnaN)
Enzymes [BR:
tws01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TW002 (dnaN)
DNA replication proteins [BR:
tws03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TW002 (dnaN)
DNA repair and recombination proteins [BR:
tws03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TW002 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
CAD66694
LinkDB
All DBs
Position
1767..2900
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AA seq
377 aa
AA seq
DB search
MKLIVDRGLLSSSVNFVTRMIPARPPSPILSGMLIEAKNEKVTLSTFNYETSAKVEFSAN
VIEGGKVLVPGTLISSISQKLPDEPVEISKEDEKISLTCGPVNYILNLMPIAEYPPLPNL
ENAEQYRIPSEDFVKSVSQVTTSAAKDDISAVITGINLRLSNESIELTGTDRYRVAVKTL
NSVSGHPSDSSVIVSSKTLFEVSKTLGNLESEISVFIKNDGENKVIGFESGNKTVTSLLI
SGNYPPVAKLFTEETGHYAILKTSDFLESTKRVSVVVERDEPIEFSFVKNTVTIKGSGIA
LASEKVECELFGDEISIMLRPQFLCDGLIACQEDFIKVAFTKPSVKNRPGPVLITPKLSN
KEKIDFKYLLQPNLFAK
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgattgtcgatagaggtctccttagttcctcggtaaatttcgtaacccgtatg
attcctgcaagacctccatcaccaatactgtctgggatgttaattgaggcaaagaatgag
aaagttactctttcaacttttaattacgagacatcagcaaaagtcgaattcagcgcaaat
gtaatagaaggcggaaaggtcttagtaccgggaactcttattagtagtatttcgcagaaa
ttgcctgatgaaccagtagagataagcaaagaagatgaaaaaatttctcttacctgcgga
cctgtaaattacatacttaatctaatgccgatagcagagtatccgccactacctaacctt
gagaatgcagagcagtataggataccttctgaagattttgttaaatcagtctcgcaggtt
acaacatcggccgcaaaagatgatataagcgcagttataacaggaataaacctaagactt
tctaatgaatcaattgaactaacaggaacagaccgttatagagtcgcggtgaagacctta
aatagcgtatctggacatccatctgattcatctgttattgtgtcgtctaaaacccttttt
gaggtttcaaaaacgctcgggaatttggaaagtgaaatatcagtttttataaaaaatgac
ggagaaaataaagttatcggatttgaatcgggaaataagacagtaacgtcgctcttaatc
tcggggaattatccgccagttgcaaagctatttacagaagaaacaggtcattatgcaatc
ctgaaaacaagtgatttcctggaatcgacaaaaagggtctctgtcgtagttgagagagat
gagccaattgagttttcttttgtaaaaaatacagttacgataaaaggctcagggatagca
cttgcaagtgaaaaagttgagtgtgaactatttggtgacgaaataagtattatgttgagg
ccgcagtttttatgcgacggacttattgcttgtcaagaggactttataaaggttgcattc
acaaagccaagcgttaaaaataggccaggacctgttcttataacaccaaaattatccaat
aaagaaaaaatagactttaagtaccttttacagccaaatttatttgcaaaataa
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