Thalassospira xiamenensis: TH3_01395
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Entry
TH3_01395 CDS
T03639
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
txi
Thalassospira xiamenensis
Pathway
txi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
txi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TH3_01395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
txi03400
]
TH3_01395
Enzymes [BR:
txi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TH3_01395
DNA repair and recombination proteins [BR:
txi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TH3_01395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DEAD
ResIII
PriA_CRR
Helicase_C
AAA_30
RUBY_RBDX
zinc-ribbons_6
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AJD50405
UniProt:
A0A0B4XUK3
LinkDB
All DBs
Position
309484..311730
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AA seq
748 aa
AA seq
DB search
MSAAKAISGNLFGDDPAFQVTGETISVLPPLPLAGPYDYLVPEGLSVQPGDFVEIPLGRQ
TQRGVVWGKARGDVDPAKLREIYGVLQAPPMADVTRKFVDWVSAYTMAPQGAVLRMAMSV
ADALEPPKPIFRFTLADPAEGEGDGESSLRMTPPRKRVMAFLRDHPPMEQADIMRETGAG
ASVIKGLVEAGVVRRLMVTPPSPFDDPDLDIARPHLSEAQERAADMLCAKVAGDGFSVTL
LDGVTGSGKTEVYFEAIRTALEAGRQVVVLLPEIALSAQWLQRFRDRFGVEPALWHSEVG
QARRRDTWRAVADGSAKLVVGARSALFLPYANLGLIVVDEEHEHAFKQEDGVIYHARDMA
VARAHLGGIPAILASATPSLETLANVEAGRYERVELSERHGMAVLPSVEIVDIRQDRPER
QRWITPTLKKRLAETFAAGEQAMLFLNRRGYAPLTLCRACGHRFQCPNCTAWLVEHRAWG
KLQCHHCGYQAKAPDSCPACGAEEKLAACGPGVERLYEEAVETFPQIRIEVATSDNIAGP
KAAAELVNRVHNHEVDLLIGTQILAKGYHFPMLTLVGVVDADLGLAGGDLRAAERSYQLM
TQVAGRAGRGDRPGMVLLQTADPSNRVIKAIAAGDRDAFNEVELSQRMTHGMPPHGRLAA
LIISGKKENEVDEAAWRIGRAAPRGDGIVVLGPAPAPLSLLRGRYRRRFLIRADKQVRLQ
AMIHDWLSKVKTPGSVRVQIDIDPYSFM
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgcaaaggccatatcgggaaatctgtttggtgatgatccggcctttcaggtg
acgggtgaaacgatcagtgtcctgccgccgctgcccttggcgggcccgtatgattatctt
gtccccgaggggttgagcgttcagcccggcgactttgtcgaaattccactgggccgtcag
acccagcgcggcgtcgtctggggtaaggccaggggcgacgtcgatccggccaagctgcgc
gaaatttatggcgttttgcaggcaccgccaatggccgatgtgacgcgaaagttcgtcgat
tgggtgtcggcctataccatggcaccgcagggggcggtgttgcgcatggcgatgagtgtt
gccgacgcgcttgagccgccaaagccgattttcagatttacccttgccgatccggcagaa
ggggaaggcgatggcgaaagcagccttcgcatgacgccgccgcgcaagcgggtgatggcg
ttcttgcgtgaccatccgccgatggaacaggccgatatcatgcgcgaaaccggtgccggg
gccagcgtgatcaaggggctggtcgaagcaggcgtcgtccggcgtttgatggtcaccccg
ccatcgccgtttgacgaccccgaccttgatattgcgcgcccgcatttgtcggaggcacag
gaacgcgcggcagacatgctgtgtgccaaggtggcgggggatgggttttcggtcacgttg
cttgatggcgtgaccggttcgggcaagaccgaggtatatttcgaagcaatccgaaccgcg
ttggaggcgggacggcaggtggtggtcctgttgccggaaatcgccctttcggcgcaatgg
ttgcagcggttccgtgaccgattcggggttgagccggccctttggcattccgaagtcggg
caggcgcggcgacgcgatacatggcgggcggtggccgatggatcggcaaagcttgtggtc
ggggcaaggtccgcactgtttctgccctatgccaatctggggctgatcgtggtggatgaa
gaacacgaacatgcgttcaagcaggaagacggcgtgatttatcatgcgcgtgacatggcg
gttgcgcgcgcgcatctgggcgggataccggcgattctggcgtccgccaccccgtcgctt
gagaccctggcgaatgtcgaagccgggcggtatgagcgggtcgagctttcggaacgccac
ggcatggcggttttgccaagtgtcgagattgtcgatatccggcaggacaggccggagcgg
caacgctggatcacgccgaccttgaaaaagcggctggcggagacatttgccgccggggag
caggcgatgctgttcttaaaccggcggggttatgcgccgctgacgctttgccgggcctgc
gggcaccggttccagtgcccgaattgtacggcgtggctggtggaacaccgggcatggggc
aaattgcaatgccatcattgcggctatcaggccaaggcccccgatagctgcccggcctgt
ggggcggaggaaaagcttgcggcgtgcgggccgggggtggaacggctttatgaggaagcg
gtcgagacattcccgcaaatccgcatcgaggtcgcgacatcggacaatatcgccgggcca
aaggcggcggcggagcttgtcaatcgggtgcataatcacgaggttgatttgctgatcggc
acacagatcttggccaagggctatcatttcccgatgctgacccttgtgggggtggtcgat
gccgatcttggccttgcgggtggggatctgcgcgcggccgaacgcagttatcagttgatg
acccaggtggcggggcgggccggacgcggggatcggcccggcatggtgttgttgcagacc
gccgacccgtccaaccgggtgatcaaggcgattgccgcgggggatcgcgatgcgtttaac
gaggttgaattatcgcagcgcatgacgcatggcatgccgccgcatggaaggttggcggcc
ctgatcatttcggggaaaaaggaaaacgaggtcgacgaagccgcatggcggattggccgg
gcggcaccgcgcggtgatggcattgtcgttctgggaccggccccggccccgttatcgttg
ctgcgcgggcggtatcgccgccgtttcctgatccgggcggataaacaggtgcggttgcag
gcgatgatccatgactggttatcaaaggtgaaaacaccgggcagtgtccgggtgcagatc
gatatcgatccttacagctttatgtag
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