Thalassospira xiamenensis: TH3_10225
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Entry
TH3_10225 CDS
T03639
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
txi
Thalassospira xiamenensis
Pathway
txi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
txi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TH3_10225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
txi03021
]
TH3_10225
03400 DNA repair and recombination proteins [BR:
txi03400
]
TH3_10225
Enzymes [BR:
txi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TH3_10225
Transcription machinery [BR:
txi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TH3_10225
DNA repair and recombination proteins [BR:
txi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TH3_10225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AJD52161
UniProt:
A0A0B4XY98
LinkDB
All DBs
Position
complement(2188493..2188831)
Genome browser
AA seq
112 aa
AA seq
DB search
MARVTVEDCVEKIPNRFELVMLAAQRARNISAGAELTIDRDNDKNPVVALREIAEQTVDY
DDLRNGMVSGLQRHVEVDEPEESEDDFGPKLMAEAIQDASVGVTIPSADEDE
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgttaccgtcgaagattgcgttgaaaagattccgaaccgcttcgagctcgtg
atgctggcagctcagcgtgcacgcaacatctcggccggtgccgaactgaccattgatcgt
gacaacgacaagaacccggttgtcgctttgcgtgaaatcgcagaacagaccgttgattat
gacgatctgcgcaatggcatggtttccggcctgcagcggcatgttgaagtcgatgaaccc
gaagaatccgaagacgattttggtccgaaactgatggcagaagcaattcaggatgcctcg
gttggtgtgaccattccgtctgctgacgaagacgaataa
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