Ursus arctos horribilis (North American brown bear): 113248883
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Entry
113248883 CDS
T05909
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
uah
Ursus arctos horribilis (North American brown bear)
Pathway
uah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113248883 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uah03019
]
113248883 (PATL1)
Messenger RNA biogenesis [BR:
uah03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113248883 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
113248883 (PATL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
113248883
NCBI-ProteinID:
XP_026346276
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAIDDDWQEAHERLAELEEKL
PVAVNEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAVMRAVQTRPVLQPQPGS
LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
IIGSPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCSV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLPPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQVLPPAPGFRAFFSAAPPAAPPPPQQHSPGPGPHLQNLRSQAPMFRPDTTHLHP
QHRRLLHQRQQQNRNQHRSLNGAGDRGSHRSSHQDHLRKDPYANLMLQREKDWVSKIQMM
QLQSTDPYLDDFYYQNYFEKLEKLSAAEEVQGEGPKKERTKLITPQVAKLEHVYKPVQFE
GSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDY
ERRYLLSLEEERPALADERKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVAR
ILPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTVTSLLQQL
MNLPQSAAAPAPPNPHLAAVLQNKFGLSLLLVVLSRGEDLQSSDPATEPTQNNQWTEVMF
MATRELLRIPQAALAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttagaggattgtcctctggatgaagatgaagatgcatttcag
ggcttgggagaagaagatgaagagattgatcaattcaatgatgatacatttgggtcaggt
gccattgatgatgattggcaggaagcacatgagcgcctggctgaattggaagagaagctg
ccggtggcagttaatgaacaaacaggcaatggagaaagggatgagatggacttgttgggt
gaccatgaggagaatctggcagaaaggctcagtaagatggtgattgaaaatgagctagaa
gatccagctgtcatgagggcagtgcagaccaggccagttctgcaaccccaaccaggaagt
ctcaattccagcatctgggatggatctgaagttctgaggcgaatccgaggaccactcctt
gctcaggaaatgcctacggtgtctgtattagaatatgccctgcctcagaggcccccacag
ggtccagaagatgatcgagacctttccgagcgtgcattaccacggcggtcaacttcacct
atcattgggagtcctcctgttagagccgtccccataggcaccccgcctaagcagatggct
gtacccagcttcaaccaacagatcctgtgtccgaagcctgtccatgtccggcccccgatg
cccccgcggtatcctgctccctatggtgagaggatgtctccaaaccagctctgcagtgtc
ccgaactcttccctactgggtcaccctttccctcctagtgttcctcctgttctcagcccc
ctccagagagcacagcttcttggaggagcacagctaccgcctggacggatgtctcccagc
cagtttgcacgggtccctggatttgttggtagtccgcttgccgccatgaatcccaagttg
ctgcaggggcgagtagggcaggtgcttcccccagcacccggcttccgtgccttctttagt
gctgcgccccctgccgctccaccgcctccgcagcagcactcccccggcccagggcctcac
ctgcaaaacctaagatctcaggccccaatgtttagaccagacacaactcacctccaccca
cagcaccgtcggctcttgcatcagagacagcaacagaacagaaatcagcaccggagtctc
aatggggccggagacagaggaagtcaccggagcagtcatcaggaccacctccggaaggac
ccctatgccaacctcatgctgcagcgagagaaggattgggtctcgaaaatccagatgatg
cagctgcagagcactgacccgtacctggacgatttctattaccagaattactttgaaaaa
ctggagaaactgtcagctgctgaagaagttcaaggcgagggcccgaaaaaggagcgcacc
aagctcattacccctcaggtggccaaactggagcacgtctacaagccagtgcagttcgag
ggctctttgggaaagcttaccgtctctagtgtgaataacccccgaaaaatgattgatgct
gttgtgacatcacggagtgaggatgacgagacaaaagaaaaacaggttcgggacaagaga
cgaaaaacccttgtcataattgagaaaacctatagtttactcctggatgtggaggattat
gaaaggcggtatctcctaagtctagaagaagagcgacctgccctggcggatgaaagaaag
cacaaaatttgtagcatgtatgacaacttaagggggaaattgcctggacaagagaggccg
agcgatgaccactttgtacagatcatgtgtatccgaaaagggaagagaatggtcgcccgt
attcttcctttcctctccacagagcaagcagctgacattctcatgacaacagctaggaat
ctccctttccttatcaagaaggatgcacaagatgaggtgctgccatgcttactgagtccc
ttctctctgctcctctatcaccttccgtcagtgaccgtcaccagccttctgcaacagctc
atgaacctacctcagagcgcagctgcaccagcgccccccaaccctcacctcgccgctgtg
ctccagaacaagtttggcctgtcactgctccttgtcgtcctgagccgtggggaagaccta
cagagttcagaccctgctacggaaccaacacagaacaaccagtggacggaggtgatgttc
atggcaacccgagaacttctccggatcccccaagcagccctggccaagccaatctctata
cccacaaacctggtgtccctcttttctcgctatgttgaccgacaaaaactgaacttgctg
gagacaaagctgcagctagttcaggggatccgatag
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integrated database retrieval system
