KEGG   Ustilago maydis: UMAG_04669Help
Entry
UMAG_04669        CDS       T01021                                 

Definition
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
uma  Ustilago maydis
Pathway
uma03030  DNA replication
uma03410  Base excision repair
uma03420  Nucleotide excision repair
uma03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:uma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    UMAG_04669
   03410 Base excision repair
    UMAG_04669
   03420 Nucleotide excision repair
    UMAG_04669
   03430 Mismatch repair
    UMAG_04669
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:uma03032]
    UMAG_04669
   03400 DNA repair and recombination proteins [BR:uma03400]
    UMAG_04669
Enzymes [BR:uma01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     UMAG_04669
    6.5.1.6  DNA ligase (ATP or NAD+)
     UMAG_04669
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     UMAG_04669
DNA replication proteins [BR:uma03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    UMAG_04669
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     UMAG_04669
DNA repair and recombination proteins [BR:uma03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     UMAG_04669
   NER (nucleotide excision repair)
    Other NER factors
     UMAG_04669
   MMR (mismatch excision repair)
    Other MMR factors
     UMAG_04669
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID: 23564774
NCBI-ProteinID: XP_011390943
UniProt: A0A0D1CLJ8
LinkDB All DBs
Position
13
AA seq 1068 aa AA seqDB search
MAPSRKRVDGSDQPLTRTKKQKSGQQLALTSFFTSPSSVSKPTFVAGEPTSPTPSVAKAK
QKQEHIVVHIDGKPDEVGSNEAVASQEEKDAAFAIQLAAQEAGVSTAEYRLCIKGDEDLA
RRLHEQWSGQDEENIKDRESSTKADTSSPLQGHATPTAPASPGKKPGATQKPVDLAALDA
SIQAIRLGDDIFVFDPWTIDTSSWPVTSNKHGVLAPTTPYALLTHAFVLITATRSRLAIT
SVLTNLLRTVRAHDPESLLATVYLVSNHIAPPYDGVELGLGGSIINKAIKSVTGKSARFM
KQVWDRTGDPGDVAYEAKKDVKALVRPAPITVQRLFSNLHSIARLSGAGSANQKLGYVTK
LLVASRGEETRFLVRTFISHLRIQAVRTTIATALARTFALVEERATLVEPSNAKEKERAS
LLLVHPNERRGLLANAVKPKERQDAQRLALMERLTRAEKLVREVRARHPNFGVIVPSLLE
HGLAGLSEHVPLRIGTPISPMLGSITRSLGAMHEKLGPRAFVSEFKYDGQRCQIHAIYVP
RSAGLEARKSIKDGDATKCGKWVGKNGEIYVRLFSRHLEEMTEKYPDITDMVPILMGQES
ESDANIGGSAFIDTSSCPSKQRLQDATEAEVGVKAQQAGAQKAQGRGQAITSFIMDAEVV
AMDLEGRLLPFQTLANRSRKDVNLHDIKVKVGVFAFDLMYLDGESLLKSSFRTRRRLLHS
RFLALFAQSALIARFAHVRSCESTDADEVARFFAQAQEYKCEGIMVKSLDHHWEAPPTRT
EASDDDVGNPSGRLQKLADVVEDDLAMDNEDEAIQTLRDGDDDKHSGGNAAESMMARTEL
GKGVNGRGKALLSTYEPDKRCESWLKVKKDYVDGLGDSLDLVPIGAWHGMGRKATWWSPM
LLALYDPSRGVLQAVCKCISGFTDAFYKELNVRYAEGSETCVRAEYGKGSPFGIELETGS
LWPDVWWKPSEVWEIRGADVTISPNYTAALGLVSEERGLSIRFPRFIQRREDKTIEQAST
PASLAKIYFEQQNAAPAAAQHGEKAEQDAASDDEGGQLATAADDGFEF
NT seq 3207 nt NT seq  +upstreamnt  +downstreamnt
atggccccatctaggaagcgggtcgatgggtcagaccagcctttgacacgcacgaagaaa
cagaaatctggacagcagttagctctaacgtcgttcttcactagtccttcatccgtgtca
aaaccgacgtttgtagcaggagagccaacctctccgacgccaagcgtagccaaagccaag
cagaagcaagagcacatcgttgtgcacattgacggcaaaccggatgaggtaggatcgaac
gaggcagtcgcgtcccaggaggaaaaggatgctgcttttgcgatacagctggctgctcaa
gaggcaggagtctcgactgctgagtatcgattgtgcatcaagggcgatgaggatctggca
agacgtctacacgagcagtggtccggacaagatgaggaaaatatcaaggatcgcgagagc
agcacaaaagctgatacatcgtctccgcttcaagggcatgcaacacccacagcccccgct
tctcctggcaagaaaccaggtgcaacacaaaagcccgtcgatctggcggcactggatgca
tccatacaggcaatccgtttgggtgacgatatctttgtttttgatccttggactatcgat
acctcttcatggcctgtgactagcaacaagcacggtgttcttgcgcccactactccgtat
gcgctcttgacgcacgcatttgtgcttatcacggcgacgcgatcccgactagcgatcacc
agcgtgctcaccaatctgcttcgcacggtgcgtgctcatgatccggaatcgctacttgcc
accgtctatcttgttagcaaccatattgcgccgccctatgacggcgttgagctcgggctg
ggtggatcgatcatcaacaaggctatcaagtcggttacgggcaaatcggcaagattcatg
aagcaggtgtgggacaggaccggcgatcctggcgatgtcgcgtacgaggccaagaaggat
gtcaaggcgcttgttcgtccagctcctattacagtgcagcgtctgttttcgaatttgcat
agcatcgcgcggctgagtggggcgggaagtgcgaaccagaagctgggatatgtaaccaag
ctgcttgttgcgagccgtggtgaagagacgcgcttcctggtgcgaacgtttattagtcat
ttacgtatccaagcggtacgaacgacgatagcgactgcactggcacgcacgtttgcgctc
gttgaagagagagcgacgctggtcgaacctagcaatgcaaaagaaaaggagagagcatcg
ctgcttctggtacatccgaacgagcgccgaggcttgctggcaaacgctgtcaagcccaaa
gagcgccaagatgcacagcgtcttgcgctgatggagcgcctaacacgtgccgaaaagctg
gtccgtgaggtgcgcgcgcgacaccccaactttggcgtgatcgttccatcgctacttgaa
cacgggctagcaggcttgtcggagcatgttccacttcgcatcgggacacccatatcaccg
atgttggggtctatcacgcgatcgctgggcgcaatgcacgaaaagctcggaccaagagcc
ttcgtgtccgagttcaagtacgacgggcagagatgtcagattcacgcgatctatgtaccg
cgaagtgctggactggaagcgcgcaaaagcatcaaggatggtgatgcaaccaaatgtgga
aaatgggtggggaagaacggcgagatatacgtgaggctgttctcgaggcacctggaagag
atgacggaaaagtatccggacatcacagatatggtacccatcttgatgggtcaggagagc
gagtcggatgctaacatcggtgggagcgctttcatagacacgtccagctgtccaagcaag
cagcgactacaagacgcaacggaagcagaagtgggtgtcaaggcacaacaggcgggcgcg
cagaaagcgcaaggcagaggacaggccatcacttcgttcatcatggacgccgaggtggtg
gcgatggatttggaggggcgcttgctgcctttccagacgctggcgaatcgcagtcgaaag
gatgtgaatttgcacgatatcaaggtgaaagtgggcgtgtttgcatttgacctgatgtat
ctggacggcgagtcgttgctcaagtcttcctttcgaactcgacgcagactgttgcatagc
cggtttcttgctctgtttgcgcagagcgcgctgatcgcgcgtttcgcgcacgtacgctcg
tgcgagagtacagacgcggacgaggtggcgcgcttctttgcgcaggcacaagagtacaag
tgtgaagggatcatggtcaagtcactggatcaccactgggaagctcctccgactagaacg
gaggcaagcgacgacgacgttggcaatccgtcgggtcggctgcaaaagctggccgatgtg
gtagaggatgacctggcgatggacaacgaagacgaagcgatacagacgctaagggatggc
gacgatgacaagcatagcggagggaatgcagcggaatcgatgatggcacgaaccgagttg
ggaaagggcgtcaacggacgaggcaaggcgctgttgtcgacgtacgagccggacaagcga
tgcgagtcgtggctcaaggtcaagaaggactacgtggacgggctgggtgactcgctagac
ttggtaccgattggtgcgtggcacggcatgggacgcaaagcgacgtggtggtcgccgatg
ctgcttgctctgtacgatccgagcagaggagtgctacaggcggtgtgcaagtgcatttcg
ggattcaccgatgcgttttacaaggagctcaatgtgcggtacgcggaaggcagcgagaca
tgtgtaagagcagagtacggaaaaggctcaccgtttggaatcgagctcgagacaggctcg
ctttggccagacgtgtggtggaagccgagcgaggtgtgggagattcgaggagccgacgtg
acgatcagtccaaactacactgcggcgttggggctggtgagcgaagaacgaggcctgtcg
atccggtttccacgattcattcagcgccgagaggacaagacaatcgagcaagctagcaca
cctgccagcttagccaagatctactttgaacagcaaaacgcagcgcccgcagctgcgcag
cacggagagaaggcagagcaagacgctgcgagtgacgacgaaggcggacagcttgccact
gctgcggacgacggattcgagttctga

DBGET integrated database retrieval system