KEGG   Ustilago maydis: UMAG_06296
Entry
UMAG_06296        CDS       T01021                                 
Name
(RefSeq) putative TFIIH/NER complex subunit protein
  KO
K03144  transcription initiation factor TFIIH subunit 4
Organism
uma  Ustilago maydis
Pathway
uma03022  Basal transcription factors
uma03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:uma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    UMAG_06296
  09124 Replication and repair
   03420 Nucleotide excision repair
    UMAG_06296
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:uma03021]
    UMAG_06296
   03400 DNA repair and recombination proteins [BR:uma03400]
    UMAG_06296
Transcription machinery [BR:uma03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     UMAG_06296
DNA repair and recombination proteins [BR:uma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     UMAG_06296
SSDB
Motif
Pfam: Tfb2 Tfb2_C Helicase_C_3
Other DBs
NCBI-GeneID: 23565933
NCBI-ProteinID: XP_011388300
UniProt: A0A0D1CUU7
LinkDB
Position
4:complement(670070..671545)
AA seq 491 aa
MASQRHTPGPGQGLTSTAKGGTNTALAISEHSRAAGIGAETIDDFLDRQPRSVLIRLYQK
PASCLAIFRLLPMMARQLIMHMLFLDVPLAADDFLAWIKKEVKNEFDAAVDKLSRLSIIQ
LKASAGKQMLLLNAGFTEGMRRALTGGGKHRSFGVPCDTEDKNAVDVAFLDQYARTKWET
ILHYMVGSDNSSTPREPVLYLLRRSNLMQPRTASSSNGGLNITSRGFQFLLEDVNTQLWD
LLLQYLDMAEERNMDLVEVLAFLFMLGSLELGRDYSTEELPETQLHMLEDFRDYGLVYQR
KASSRRFYPTRLATTLTSSAAVPLLSSNGTEQEERGYIILETNYRLYAYTSNPLRVAVLS
LFVTIKARFPNLVVGSITRDSVKSALANGITAEQIITYLTHHAHLQMHRNDPLLPVTVSD
QIRLWEREKNRVQQNLGSLFTDFTSQFDFEEVRNYAKQLGVLVWQDEEKRRFFVDEAGNE
PVRDYIRRRRA
NT seq 1476 nt   +upstreamnt  +downstreamnt
atggcgagccagcgacatacaccagggcctggccaaggactcacatccacagccaaagga
ggtaccaacactgcgcttgccatttctgaacactcgagagcagctggcattggagctgaa
accatcgacgactttttggaccggcaacctcgatccgtgctcatccgtctctaccagaaa
ccagcatcctgtctcgctatcttccgactgctccccatgatggcgcgccagctcatcatg
cacatgctctttctggatgttccgctggcagcagacgacttcttggcgtggatcaaaaag
gaggtaaaaaatgagtttgatgctgctgtcgacaagctctcccgtctgtccatcatacag
ctcaaggcatcggcgggcaagcagatgctactgctcaatgccggcttcactgaaggaatg
cgaagagccttgacgggcggaggaaaacatcgatcttttggtgtaccctgtgatacagaa
gacaagaatgcggtggatgtggcttttctggatcagtatgctcgcacaaagtgggaaacg
attctccattacatggttggcagcgataactcgagcactcctcgtgagcccgtgctctac
cttttacgtagaagcaatctcatgcagcctagaaccgcctcgagctcgaatggaggactc
aacatcactagccgtggattccagtttttgttagaagacgtcaacacacagctgtgggat
ttgctcttgcaatacctcgatatggccgaggagcgaaacatggatctggtcgaggtgctc
gcctttctcttcatgctgggcagcttggagctcggcagagattactcgacagaggagttg
cccgaaacacagctgcacatgctcgaagatttccgcgactacggtcttgtctatcaacgc
aaagcgtcgagccgacgcttttaccctacacgccttgccaccaccctcacttcgtccgct
gctgtacctctgctgtcgagcaacggaacagagcaggaagaacgaggctacatcatcctc
gagaccaactaccgcctttacgcgtatacttcgaacccgctccgagtcgcagtgctgtcg
ctgtttgttaccatcaaggccaggttcccgaatttggtcgttggatccattacgcgtgat
tcggtcaagtcggccctggcaaacggcatcaccgccgaacagatcatcacgtatctcacg
catcacgcacacctccagatgcatcgtaacgatcctctacttcctgtcaccgtgtcggat
cagatcagattatgggagcgcgaaaagaaccgagtccagcaaaacttgggttcgctcttc
accgactttacaagtcaattcgactttgaagaggtgcgcaactacgccaagcagctcggt
gtgctggtatggcaggatgaggagaagagaagattcttcgtggacgaagcgggcaacgaa
cctgtgcgagactatattcgaagaagaagagcgtag

DBGET integrated database retrieval system