Ustilago maydis: UMAG_10124
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Entry
UMAG_10124 CDS
T01021
Name
(RefSeq) hypothetical protein
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
uma
Ustilago maydis
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
uma03016
]
UMAG_10124
Enzymes [BR:
uma01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
UMAG_10124
Transfer RNA biogenesis [BR:
uma03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
UMAG_10124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
23566193
NCBI-ProteinID:
XP_011386680
UniProt:
A0A0D1E8E1
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All DBs
Position
1:1393665..1394756
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AA seq
363 aa
AA seq
DB search
MSSLEEMSMSATAAAERTVASLTERYSGRVQIHLHASSSLPSRLVSWSGDDTWDDLPVAL
VWTVDSLRLLRSYGVIGSFTGTLAQFAQQNVFLGLPVQLMAEEVVFLVRRACAVVIDESE
SYRASSAQERNEVDAKVQEDRASQQLGAWYERQQLRAQHSSHPIEQEPQWQELQNQPWHY
TIPSRSTFPWYTPTAYTKLSKLQRVFAFPRSRHEMERCALFDHMLTNGMWCMNGLRFGGS
LAVYPGDPLRYHSHYTAQLIGQNNCISIMSLVANGRLGTSVKKTHLLCCVDETDRTLDDE
LRTRDLHPSHIPTPLQCILQGNFDTAQRAENDPTSAVEQDPDAKPSTFAHFNVFSLAWAG
FGT
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctttagaggagatgtctatgtctgctacagccgcggccgagcggacggtggcg
agtcttacagaacgctatagcggacgtgtgcagattcacctgcatgcatcgtcgagtttg
ccgtcgaggctcgtttcttggagcggcgacgacacttgggatgatttaccagtagcgctc
gtatggacggtggactcgcttaggctactgcgaagttatggcgtgataggaagttttacg
ggcacattagcgcagtttgcgcagcaaaatgtgtttttgggactacctgtacagttgatg
gcggaagaagtggtgtttttggtacgacgagcatgtgccgttgttattgatgaaagcgaa
tcataccgcgccagcagtgcacaagagaggaacgaggtagacgccaaggtgcaggaggat
cgagctagtcaacaactcggtgcttggtatgaacgacaacagctgcgtgcgcaacattca
tcgcatccaatcgagcaagaaccacaatggcaagagctgcaaaatcagccgtggcactac
acgattccgtcaagatccacgtttccatggtacacaccaacagcatatacgaaactctcg
aaactgcagcgagtatttgcgtttcctcgatcaagacacgagatggaacgatgtgcacta
ttcgaccacatgctcaccaacggcatgtggtgcatgaacggtctacgattcggcggatcg
ctagctgtctaccccggcgaccctcttcgctaccacagccactacacagctcaactgatc
ggccagaacaattgcatcagcatcatgtctcttgtcgccaacggacggctcggtacgagt
gtgaaaaaaacgcacctcctatgctgtgtcgacgaaaccgaccgcacgttggacgacgaa
ctacgcaccagagatctgcatcccagccacatcccaacaccgttgcagtgcatactacag
ggcaactttgatacagcccaacgcgccgaaaacgaccctacatcagccgtcgagcaggat
ccagatgcaaagccctcgacattcgcgcatttcaacgtgttcagtcttgcgtgggccgga
ttcgggacgtaa
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