KEGG   Ursus maritimus (polar bear): 103667279Help
Entry
103667279         CDS       T03271                                 

Gene name
LIG3
Definition
(RefSeq) DNA ligase 3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
umr  Ursus maritimus (polar bear)
Pathway
umr03410  Base excision repair
Module
umr_M00296  BER complex
Brite
KEGG Orthology (KO) [BR:umr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    103667279 (LIG3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:umr03400]
    103667279 (LIG3)
Enzymes [BR:umr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     103667279 (LIG3)
DNA repair and recombination proteins [BR:umr03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     103667279 (LIG3)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C BRCT_2 RNA_ligase mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID: 103667279
NCBI-ProteinID: XP_008693621
UniProt: A0A384CFK0
LinkDB All DBs
Position
Un
AA seq 995 aa AA seqDB search
MTLTFKILFPPTLRALRRKELCLFRERHHWPDRRQFGHWSETDLLHGHCLLQRRKPALSF
QEGHLRPRATCLVFLPGAHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRI
GKVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQISQ
HIADLSSKATGTPKKKAVVQAKLTATGQVTSPVKGASLVTNSNPRKFSGFSAKPNNSGAA
RSSPPPKASLSSSRCDPKHKDCLLREFRKLCAMVAENPSYNTKTQIIQDFLRKKGGDGFH
GDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFEQ
SKSFPPAPKSLLTIQEVDEFLLRLSRLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDL
KMNAGAKHVLDALDPNAYEAFKASRNLQDVVERVLRNEQEVEKEPGRRRALSVQASLMTP
VQPMLAEACKSIEHAMKKCPNGMFSEIKYDGERVQVHKNGDRFNYFSRSLKPVLPHKVAH
FKDYIPQAFPGGHSMILDSEVLLIDANTGRPLPFGTLGVHKKAAFQDANVCLFVFDCIYF
NDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVTKAADLADMINRVIREGLEGLVLK
DVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPDS
QKWCTVTKCSGGHDDATLARLQKELDMVKISKDPSKIPSWLKINKIYYPDFIVPDPKKAA
VWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKERADFTV
AAGEEGSSTTGGSSGENEGTSGSAGARKASRASPKQPSTSAKKAGGRLSSPNRRGGHQPT
VKVGQKRKAPAETPCPAKVLLDIFTGVRLYLPPSTPDFSRLRRYFVAFDGDLVQEFDMAS
ATHVLGSRDKNPEAQQVSPEWIWACIRKRRLVAPC
NT seq 2988 nt NT seq  +upstreamnt  +downstreamnt
atgaccttgactttcaagatcctcttcccaccaaccctccgcgcactcaggcgaaaagaa
ctgtgcctcttccgagagcggcatcactggcctgacagaagacagttcggccattggtca
gaaacagatctgcttcatgggcactgcctcctccagagaagaaagcctgctctgtcattc
caggaaggccatctaagaccacgtgccacctgccttgttttcctgccaggggcgcatgtg
ggactctgcagtggcccctgtgagatggccgagcaacggttctgtgtggactatgccaag
cgtggcacagccggctgcaaaaagtgcaaggagaaaattgtgaagggtgtatgccggatc
ggcaaagtggtgcccaatcccttctcagagtccgggggtgatatgaaagagtggtatcac
attaaatgcatgtttgagaaactggagcgggcccgggccaccacaaaaaaaattgaggac
ctcacagagctggaaggctgggaagagctggaagacaacgagaaggaacagataagccag
cacattgcagatctgtcttctaaggcaacaggcacaccaaagaagaaagccgttgtccag
gctaagctgacagccactggccaggtgacctctccagtgaaaggtgcctctctcgtcacc
aatagcaatccccggaaattttctggtttttcagccaagcccaacaactctggggcagcc
cgctcaagccctccccctaaggcaagtttgtcatcaagcagatgcgaccccaagcacaag
gattgtctgctccgtgagtttcggaagttgtgtgccatggtggctgagaatcctagctac
aacacgaagacccagatcatccaggactttcttcggaaaaaaggaggagatggtttccac
ggtgacgtgtacctaacagtgaagctgctgctcccgggtgttattaagagtgtgtacaac
ttgaatgataagcagattgtgaagcttttcagccgcatttttaactgcaacccagatgat
atggcacgagacctagaacagggcgacgtgtcagagaccatcagagtcttctttgagcag
agcaagtctttccccccagctcccaagagcctccttaccatccaggaggtggacgaattc
ctcctccggctttccaggctcaccaaggaggacgagcagcagcaggccctgcaggacatc
gcctccaggtgtacggccaatgaccttaagtgcatcatcagattgatcaaacacgatctg
aagatgaacgcgggtgcaaagcacgtgttagatgcccttgaccccaatgcctatgaagcc
ttcaaagcatcgcgcaatctgcaggacgtggtggagcgggtcctccgcaatgagcaggag
gtggagaaggagccaggccggagacgcgcactgagtgtccaggcttccctgatgacgccg
gtgcagcccatgctggccgaggcctgcaagtccatcgagcacgcgatgaagaagtgtccc
aacggcatgttctccgagatcaagtatgacggggagcgagtgcaggtgcataagaacggg
gaccgcttcaactacttcagccgtagcctcaagcctgtcctgcctcacaaggtggcccac
ttcaaggactacatccctcaggctttccccgggggccacagcatgatcctggactctgag
gtgctgctgatcgacgcgaacacaggcaggccgctgccctttgggacccttggggtgcac
aagaaagctgccttccaggatgctaatgtttgcctgtttgtgtttgattgtatctacttc
aatgatgtcagcttgatggacaggcctctgtgtgagcggcggaagtttcttcatgataac
atggttgaaattcccaaccggatcatgttctcagaaatgaagcaagttactaaagctgca
gacttggccgacatgataaaccgggttatccgagaggggctggaagggctggtgctgaaa
gacgtgaagggtacatatgagcctggaaagcggcactggctgaaagtgaagaaggactat
ttgaacgagggggccatggctgacacagctgacctggtggtccttggggccttctatggg
caagggagcaaaggtggcatgatgtccatcttcctcatgggctgctacgacccagacagc
cagaagtggtgcacggtcaccaagtgttcgggaggccacgacgacgccaccctcgcacgc
ctgcagaaggaactggacatggtgaagatcagcaaggatcccagcaagatacccagctgg
ctgaaaatcaacaagatctactatcctgacttcatagtcccagacccaaagaaagctgcc
gtgtgggagatcacaggggctgagttctccaagtctgaggctcacacagccgacgggatc
tccatccggttcccacgttgcacccgcatccgtgatgataaggactggaaatctgccact
aacctcccccaactcaaggaactgtaccagctgtccaaggagagggcagacttcactgtg
gcggctggagaggaggggagctccaccacagggggcagcagcggagagaatgagggtacc
tcagggtctgcgggggctcgcaaggcctccagggcctccccgaagcagccctccaccagt
gccaagaaggcaggagggaggctgagcagccccaaccgcagaggcggccaccagccgacc
gtgaaagtggggcagaagcggaaggctcccgctgagaccccgtgcccagcaaaggtgctg
ctggacatcttcactggggtgcggctctacctgccaccctccacaccagacttcagccgt
ctcagacgctattttgtggcattcgatggggacctggtgcaggagtttgacatggcctca
gccacacatgtgctgggtagcagggacaagaaccctgaggcccagcaggtctccccggag
tggatttgggcgtgtatccggaaacgaaggctggtagccccctgctag

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