KEGG   Ursus maritimus (polar bear): 103667532Help
Entry
103667532         CDS       T03271                                 

Gene name
SETDB1
Definition
(RefSeq) SET domain bifurcated 1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
umr  Ursus maritimus (polar bear)
Pathway
umr00310  Lysine degradation
umr04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:umr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    103667532 (SETDB1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    103667532 (SETDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:umr03036]
    103667532 (SETDB1)
Enzymes [BR:umr01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     103667532 (SETDB1)
Chromosome and associated proteins [BR:umr03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     103667532 (SETDB1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    103667532 (SETDB1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET DUF5604 Tudor_4 TUDOR_5 Pre-SET MBD DUF4537 53-BP1_Tudor
Motif
Other DBs
NCBI-GeneID: 103667532
NCBI-ProteinID: XP_008693911
UniProt: A0A384CGD5
LinkDB All DBs
Position
Un
AA seq 1300 aa AA seqDB search
MSSLPGCIGLDAATAAVESEEIAELQQAVVEELGISMEELRQFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASRPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLFVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRYLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDVSCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTGTGTQFKPVEPPQPAAPAAPPAPPVPPAPPAPPLSPQAGD
NDSLESQLAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENVPAGKLGSNQTYRSPLGS
TASAPAAPPAPPAPVAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRS
AQYRGKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCD
FLFLEMFCLDPYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKER
IPGKGVFINTGPEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYKRLE
ECLPTGVYECNKRCKCDPHMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCI
YAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDG
NSGTEDPEESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSETASKDSRPPD
LGPPHIPVPPVIPVGGCNPPSSEETPKNKVASWLSCNSVSDGGFADSDSRSSFKTSEGGE
GRAGGGRGEAEKASTSGPGFKDEGDIKQAKKEDPDDRNKMAIVTESSRNYGYNPSPVKLE
GLRRPPSKTSMHQSRRLLASAQPNTDDVLTLSSSTESEGESGTSRKPATGQTSATAVDSD
DIQTISSGSEADDFEDKKNMSGPTKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKGESA
PVRKNTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFA
SKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq 3903 nt NT seq  +upstreamnt  +downstreamnt
atgtcctccctccctgggtgcattggtttggatgcagcaacagctgcagtggagtctgaa
gagattgcagagctgcaacaagctgtggttgaggagctgggtatctcgatggaggaactt
cggcagttcatcgatgaagaactagaaaagatggactgtgtacaacagcgtaagaagcaa
ctagcagagttggaaacgtgggtaatacagaaggaatctgaggtggcccatgttgaccag
ctctttgatgatgcatccagggcagtgactaactgtgagtctttggtgaaggacttttat
tccaaactgggtctgcaataccgggacagtagctctgaggatgaagcttcccggcctaca
gaaataatcgagattcctgatgaagatgatgatgtcctcagtattgattcaggtgatgct
gggagcagaactcccaaagaccagaagctccgtgaagctatggctgccttaagaaagtca
gctcaggatgtccagaagttcatggatgctgtcaacaagaagagcagttcccaggatcta
cataaaggaaccttgagtcagatgtctggagaactgagcaaggatggtgacctgatagtc
agcatgcgcatcctgggcaagaagagaactaagacatggcacaaaggcacccttattgcc
atccagacggttggaccaggaaagaagtacaaggtgaaattcgacaacaaaggaaagagt
ctcctgtcggggaaccatattgcctatgattaccaccctcctgctgacaagctgtttgtg
ggcagtcgagtggtggccaaatacaaggatgggaatcaggtctggctctatgctggcatt
gtagccgagacaccaaacgtcaaaaacaagctcaggtacctcattttctttgatgatggc
tacgcttcctacgttacacagtctgaactctatcccatttgtcggccactgaagaagact
tgggaggacatagaggacgtctcctgccgggacttcatagaagagtatatcacggcttac
cccaaccgccccatggtgctgctcaagagtggccagcttatcaagactgagtgggaaggc
acatggtggaagtctcgggtcgaggaggtggacggcagcctagtcaggattctcttcctg
gatgacaagagatgtgaatggatctatcgaggctctacacggctagagcccatgttcagc
atgaagacttcctcagcctctgcattggagaagaagcaagggggacagctccggacacgt
ccaaatatgggtgctgtgaggagcaaaggccccgtggtccaatacacccaggatctgacc
ggtaccgggacccagttcaagccagtggagcccccacagcctgcagcccctgctgccccc
cctgcgccccctgtcccacctgccccacctgctccccctctgtccccacaggcaggtgac
aatgacagcttggaaagtcagcttgcccaatctcggaagcaggtagccaaaaagagcaca
tccttccggccaggatctgtgggctctggtcattcctcccctacatctcctgcactcagt
gaaaatgtccctgctgggaaacttggcagcaaccagacgtacaggtcacctttaggttca
acagcctctgccccagcagcacccccagcacccccagcacccgtggcaccgcccgccttc
cacggcatgctggagcgggccccagcagagccctcctaccgcgcccccatggagaagctc
ttctacttacctcatgtgtgcagctatacgtgtctgtcccgagtcagacctatgagaagt
gcgcagtaccggggcaagaatcctctgctcgtcccacttctctacgacttccggcggatg
acggcccgccgccgagttaaccgcaagatgggctttcatgttatctataagacaccctgt
ggcctctgccttcggacaatgcaggagatcgaacgctatctttttgagactggctgtgac
ttcctcttcctggagatgttctgtttggatccatatgttcttgtggaccgaaagtttcag
ccctataaacctttttactatattttggacatcacttatgggaaggaagatgttcccctc
tcctgtgtcaatgagattgacacaacccccccaccccaggtggcctacagtaaggaacga
atcccgggcaagggtgttttcattaacacaggcccagaatttctggtcggttgtgactgc
aaagacgggtgccgtgacaagtccaaatgtgcctgtcatcagctaactatccaggccaca
gcctgcaccccgggcggccagatcaaccctaactctggttaccagtacaagagactagaa
gagtgtctgcccacaggagtttatgagtgtaacaaacgctgcaaatgtgacccacacatg
tgcacaaaccggttggtgcagcatggactccaggttcggctacagctattcaagacgcaa
aacaagggctggggtatccgctgcttggatgacattgccaaaggctcctttgtctgtatt
tatgcaggcaagatcctgacagatgactttgcagacaaggagggcctggagatgggtgat
gagtactttgccaatctggaccatatcgagagcgtggagaacttcaaggaaggatatgag
agtgacgccccctgttcctctgacagcagcggggtggacttgaaagaccaggaagatggc
aacagtggtacagaggatcccgaggagtccaatgatgacagctctgatgacaacttctgt
aaagatgaggacttcagcaccagctccgtgtggcgcagctatgctacccggcggcagacc
cggggccaaaaggagaacggactgtctgagacagcttccaaggactcccgccccccagac
cttggccccccacatattcctgtccctccagtgatccctgtgggtggctgcaatccaccc
tcctctgaagagacacccaagaacaaggtggcctcatggttgagctgcaatagtgtcagt
gatggtggctttgccgactctgatagccgttcatccttcaagactagcgaaggtggggaa
ggccgggctgggggaggccgaggggaggctgagaaggcctccacttcagggccgggcttc
aaggatgagggagacatcaagcaggcaaagaaagaggaccccgatgaccgaaacaagatg
gcaatagttactgaaagctctcgaaattacggttacaatccttctcccgtgaagcttgaa
ggacttcgccgcccacctagtaagactagcatgcatcagagccgacgactcttggcctct
gctcagcccaacactgacgatgtcctaacattgtccagcagcacagaaagcgagggggag
agtgggaccagccggaagcccgccactggtcagacttcagccacagcagtggatagcgat
gatatccagaccatctcctctggctccgaagcagatgactttgaggacaagaagaacatg
tctggtccgacaaagcgccaggtggcggtaaaatcaacccgaggctttgctcttaagtca
acccatgggattgccattaaatcaaccaacatggcatccgtggaaaagggggagagtgca
cctgttcgtaagaacacacgccagttctacgatggggaagagtcttgctacatcattgat
gccaagctcgaaggcaacctgggccgctacctcaaccatagctgcagccccaacctgttt
gtccagaatgtcttcgtggacactcacgatcttcgcttcccctgggtggccttctttgcc
agcaagaggatccgggctggcacagagctcacttgggactacaactacgaggtgggcagc
gtggaaggcaaggagctgctctgctgctgcggggccatcgagtgcagggggcgtcttctc
tag

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