Undibacterium parvum: EJN92_13945
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Entry
EJN92_13945 CDS
T05754
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
upv
Undibacterium parvum
Brite
KEGG Orthology (KO) [BR:
upv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
upv03032
]
EJN92_13945 (gyrA)
03400 DNA repair and recombination proteins [BR:
upv03400
]
EJN92_13945 (gyrA)
Enzymes [BR:
upv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EJN92_13945 (gyrA)
DNA replication proteins [BR:
upv03032
]
Prokaryotic type
DNA Topoisomerases
EJN92_13945 (gyrA)
DNA repair and recombination proteins [BR:
upv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EJN92_13945 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AZP13005
UniProt:
A0A3S9HLN6
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All DBs
Position
3188044..3190749
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AA seq
901 aa
AA seq
DB search
MDQFAKETLPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNVYN
RPFVKCARVVGETMGKYHPHGDASIYDTLVRMAQDFSLRYTLVDGQGNFGSVDGDNAAAM
RYTECRLDKIANEILADIDKETVDFVPNYDGKEKEPSVLPTRIPNLLINGASGIAVGMAT
NIPPHNITEVINGALHVLRNQDCTIDELIEIIPAPDFPTAGIIYGVSGVRDGYRTGRGRV
VMRAKTHFEEYGREGRTAIIVDELPYQVNKKSLLERIAENVRDKKLEGISDIRDESDKSG
MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVNGQPKLLNLKQMLECFLSHRRE
VVTRRTVFELRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPLAKLELMNRAWDSSMV
REMLTRTAADNPAGIEAFRPESLPKHYGIQTDGLYKLSDDQAQEILQMRLQRLTGLEQDK
IVNEYKDVMSEIADLLDILSKPERVTVIITDELTACMNEYGAGNKDVRRSEIVHNATDLE
TEDLITPLDMVVTLSHTGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIEQLFVANTHDY
ILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLLDGEKITVILPLSGANRSFPEDHY
IFMATSLGTVKKSPLNDFSNPRKAGIIAVALDEGDFLIGAALTDGKHDVMLFSDSGKAVR
FDENDVRPMGRTARGVRGMNLEEGQQVIALLVAENEQQSVLTATENGYGKRTPISEYTRH
GRGTKGMIAIQTSERNGKVVAATLVDPVDEIMLITTGGVLIRTRVAEIREMGRATQGVTL
IAVEDGTKLSGLQRIVETDVDTEIEGEVDASAVVTNVATDAGSDLADDAANDAGTDTGAA
E
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgcaaaagaaacactcccgatttcccttgaagaagaaatgcgcaagagc
tacctcgattacgccatgagcgtgattgttggtcgagccttgccagatgttcgtgacggt
ttgaagcctgtgcacagacgcgtgttgttcgcgatgcacgagatgaataatgtgtacaac
cgtccgtttgttaagtgcgcccgtgtggtcggtgagaccatgggtaagtaccatccccat
ggtgatgcctcaatttacgataccttggtacggatggcgcaggatttttctttgcgttac
accttagtagacggtcaaggtaactttggttctgtcgatggcgataatgccgctgcgatg
cgttacaccgagtgccgactggataaaatcgcgaatgagatactcgccgatatcgataag
gaaacagtcgatttcgttcctaactacgatggcaaagaaaaagagccgtcggtattgccg
acgcgcatccctaatctgttgatcaacggtgcatccggtattgctgtcggtatggcgacc
aatattccgccgcataatattaccgaagttattaatggtgctttgcacgtcttgcgtaac
caagattgtacgatcgatgagttgattgaaattattccggctccggatttcccaaccgcc
ggtattatttatggtgtgtctggtgtgcgcgatggttatcgcaccggtcgtggccgtgtg
gtgatgcgcgccaagacccattttgaagagtatggcagagaaggccgcaccgccatcatc
gtggatgaattgccttatcaggtgaataaaaaatccctgctagagcgtatcgccgagaac
gtgcgtgacaagaagctagagggtatttctgatattcgtgatgagtcagataaatccggt
atgcgcgtcgtgatcgaattgaaacgcggtgaagtgccagaagtggtcttgaataatctg
tataagcagacgcagttgcaagacacctttggtatgaatatggtggcgctggtgaacggt
cagccgaagttgttgaaccttaaacagatgctggaatgcttcttgtcgcatcgtcgtgaa
gtcgtgacacgtcgtaccgtatttgaactgcgcaaagcacgcgaacgcggccatgtatta
gaaggtctggcggttgcactagctaatatcgacgattttatcgccatcatcaaggccgcg
cctacgccacctttggcgaaactcgagttgatgaatcgtgcatgggatagctctatggtg
cgcgagatgttgacgcgtactgctgcggataatcctgccggtatcgaagctttccgtcct
gagagcctgcctaagcattacggtatccaaactgacggtctgtataaattgtcagacgat
caggcgcaagaaattttgcaaatgcgtttgcaacgcttgactggcttggaacaagacaag
atcgtcaatgaatacaaagatgtgatgtcggagattgccgacttgctggatattttgtcc
aagcctgagcgcgttaccgtcatcattactgacgaattgactgcctgcatgaacgaatac
ggtgcaggtaacaaggatgttcgtcgctctgagattgttcataacgcgaccgatttggaa
accgaagatttaatcacgccgcttgacatggtagtgaccttgtcgcacaccggttatatg
aagtcccaaccagtttctgaataccgtgcgcagaagcgcggcggtcgcggtaaacaagcg
atggcgactaaagatgatgactggatagagcaattgttcgtcgccaatacccatgattac
attttgtgtttcagtaatcgcggtcgcctgtactggttaaaagtgtgggaagtgccacaa
ggctcgcgcaattcgcgcggcaaacctatcgtgaatatgttcccgctcttggatggcgaa
aaaattaccgtgattttgcctttgtctggcgcaaatcgtagtttccctgaagatcattac
atcttcatggcgaccagtctcggaacggtgaagaaatcccctctgaatgactttagcaat
ccacgtaaggccggcattattgcggtggcgctggatgagggcgatttcctgatcggtgcg
gcgctgaccgatggcaagcatgacgtgatgttgttctccgattccggcaaggcggtgcgc
ttcgacgaaaacgatgttcgtcctatgggccgtaccgcacgtggtgtgcgtggtatgaat
ctggaagagggtcagcaagtgatcgctttactggttgctgagaacgagcagcaatcggta
ttaactgcgactgaaaacggttacggtaaacgtacccctatttctgaatacacgcgccat
ggtcgcggcactaagggcatgatcgcgattcaaacttccgagcgtaacggtaaagttgtt
gccgcaaccttggtcgatccagttgatgaaattatgctgattactaccggtggcgtttta
atccgtacccgggtggcggagattcgtgaaatgggtagggcaactcagggcgtgactctg
atcgcggtagaagatgggactaagttgtccgggctacagcgtatcgttgaaacggatgtc
gatactgagattgaaggcgaagtcgatgccagtgcagtcgtgaccaatgtggcgactgat
gccggtagcgatttagcagatgacgcagcgaatgatgcaggcaccgatactggcgctgcg
gagtaa
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