KEGG   Uncinocarpus reesii: UREG_07481Help
Entry
UREG_07481        CDS       T01132                                 

Definition
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
ure  Uncinocarpus reesii
Pathway
ure03030  DNA replication
ure03410  Base excision repair
ure03420  Nucleotide excision repair
ure03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ure00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    UREG_07481
   03410 Base excision repair
    UREG_07481
   03420 Nucleotide excision repair
    UREG_07481
   03430 Mismatch repair
    UREG_07481
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ure03032]
    UREG_07481
   03400 DNA repair and recombination proteins [BR:ure03400]
    UREG_07481
Enzymes [BR:ure01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     UREG_07481
    6.5.1.6  DNA ligase (ATP or NAD+)
     UREG_07481
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     UREG_07481
DNA replication proteins [BR:ure03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    UREG_07481
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     UREG_07481
DNA repair and recombination proteins [BR:ure03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     UREG_07481
   NER (nucleotide excision repair)
    Other NER factors
     UREG_07481
   MMR (mismatch excision repair)
    Other MMR factors
     UREG_07481
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID: 8439949
NCBI-ProteinID: XP_002582708
UniProt: C4JZ80
LinkDB All DBs
AA seq 828 aa AA seqDB search
MPNPASKRKRDDASDSKSFRSIDSFFRSPKKRQPQVDICTPAPPGNQALTDEELARKLQA
EWDRDAAPSRDGPHTEANTQAALLPQSVERKGDLQIADSPPKTSGVVPEKKTKGVLSLQT
SATTEDTISMSLPLDQPPLSFKPSTYIEQLREFWGLEGGRASYSILARAFSLVNSTQSRI
KIVDILVNLLRILIEGNPDSLLPAVWLATNAFAPPYVPLELGLGGSAISKALKKAYGLDN
LGLKSLYDKHGDAGDVAYEAKKKQSFTLRRPKPLSIKGVYDSLTGIANSKGTGSQENKQR
IVEQLLRDARGAEESRYIVRTLVQHLRIGAVRTTMLIALARAFLYSRPPSATFEVYLQPD
LMNLKKDELSNLYARAEEIVKASYARHPNYNDLIPCLLETGISKAVLAKCGLSLHIPLLP
MLGSITRDLTEMLTKLQGKKFSCEYKYDGQRAQVHCDTAGKVSLFSRHLEFMTDKYPDLV
SLVPQIRGDGVSSFILEGEVVAVDQESGDLLPFQTLSNRAKKNVEMSNIKINVCLFAFDL
MYLNGEPLLERSFRERRELLRSLFVEIPKRFSWVKSIDATSTDSDMILNFFREATKEKCE
GIMVKVLDTDVEAVETVGLGSAIKESSNIAKEKQKGTRKRALLSTYEPDKRLESWLKVKK
DYSTASDTLDLIPIAGWHGQGRKAKWWSPILLAVRNPETGSLEAVTKCMSGFTDKFYQEN
KEKYAEHGDNVISRPSYVDYRNEPEVWFEPQEVWEVAFADITLSPTYTAAIGLVSEERGL
SLRFPRFLRVREDKTIEEASTSAYLAELWRKQSARLQIEGVDSMQEEP
NT seq 2487 nt NT seq  +upstreamnt  +downstreamnt
atgcccaatcccgccagcaaacgtaaaagggatgatgctagtgactcgaagtcgttcagg
agtatcgactcctttttcagaagcccgaaaaagcggcaaccgcaggtcgatatctgcact
ccagctcctccaggaaaccaagctctgacggacgaggagctcgcccgaaagctgcaagca
gaatgggatagagatgctgcgcctagccgagatgggccacatacagaagcgaacacacaa
gcggctctgctgcctcagagcgtcgagcgcaaaggcgatcttcaaatagccgattcaccg
cccaaaacctcgggagttgttcctgaaaagaaaacaaaaggcgtgctgtcgctacagact
tccgcgaccacggaagacacgatatctatgtccttgcccttagaccagccaccgctgagc
tttaagccgtctacctacatcgaacagctgagagaattctgggggttggagggaggacgc
gcttcttactcaatattggcgagagcgttttccctagtcaacagcacacaaagtcgaatc
aaaatcgtggatatactagtcaacctactgaggatcttgattgaaggaaacccagacagt
ctccttcctgccgtctggcttgctacaaacgctttcgcgcccccgtacgttcccttggag
ttgggactgggaggatctgctatctccaaagctttgaagaaggcgtatgggctggataac
ttgggcttaaaatccctttatgacaagcatggagacgctggtgatgtcgcctatgaagct
aaaaagaaacagtcttttactttaaggcgaccgaagccgctctctattaaaggagtttat
gactcactgacagggattgctaatagtaaaggaacgggcagccaagaaaataaacagagg
atagttgaacaactgcttcgagatgccagaggagccgaagaaagtcggtatatcgtccga
acgctcgtccagcacctacgtatcggagcagtcagaactaccatgctcatcgccttagct
cgtgcatttctttattcaaggccaccatctgctacctttgaggtgtatttgcaacccgac
cttatgaacctaaaaaaggatgagctatccaatttatatgccagggcagaggagatagtc
aaagccagctacgctcgccatccaaactacaatgacctcataccatgccttctagaaaca
ggcatctcgaaggccgttctcgccaaatgcggtctatcgcttcatattccgttgttgcca
atgctagggagtattacgcgcgacctgacagagatgcttactaaactgcagggcaagaaa
ttcagttgcgaatataaatatgacggccaacgtgcacaagtacattgtgacacggcagga
aaagtatcacttttctcgcgccatctggagtttatgacagataaatacccggacttagta
tctcttgtcccgcagattaggggagacggtgtgtcgagcttcattcttgagggagaagtg
gtcgctgttgaccaagaatccggagatttattgccctttcagacactttccaacagagcg
aagaaaaatgttgaaatgagtaatatcaaaatcaatgtttgcctgtttgcattcgatcta
atgtacctgaatggcgagccattgctagagcgatctttcagagaacgacgcgagctgttg
cgaagcctctttgtcgagatacctaaacgattttcttgggtcaaaagcatcgacgcaacc
tctaccgattcagatatgatacttaacttcttccgggaggccaccaaagaaaaatgtgaa
ggtattatggtgaaggtattggataccgatgtcgaagctgtggaaactgttgggctgggc
tcggccatcaaagaatcatccaatatagctaaagaaaagcaaaagggaacaaggaagcga
gccttgttgtctacttacgagcccgataaacgactcgagtcatggctgaaggtgaagaaa
gattatagcacagcctctgatactctggacttgattcccatcgctggttggcatggtcaa
ggtcgaaaggctaaatggtggtccccaattctccttgctgtgcgaaatccggaaaccggg
tcgttagaggcagtcaccaaatgcatgtccggttttacggataagttctaccaggagaat
aaagagaagtatgctgaacacggcgacaatgtgatttcacgtccaagctatgtggattat
aggaacgaacctgaggtctggtttgagcctcaggaggtttgggaggtcgcttttgcagac
attacgctcagtccgacgtacacagcagcaatcggtttggtcagcgaggagcgcggattg
agtcttcggttcccaaggtttcttagggtccgtgaagataagactatcgaggaggcaagc
acatctgcatatctggctgagctttggaggaaacaaagtgcgcgcttacaaatcgaaggc
gtcgattcgatgcaagaggaaccttga

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