Variovorax sp. PAMC 28711: AX767_08635
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Entry
AX767_08635 CDS
T04325
Name
(GenBank) ATP-dependent DNA ligase
Organism
vaa
Variovorax sp. PAMC 28711
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
AMM24411
UniProt:
A0A126ZD88
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Position
complement(1729522..1731192)
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AA seq
556 aa
AA seq
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MKAFAALYRELDATTSSLAKQAALQRYLLDAAQEDAAWAVYFLAGGKPRQLVPTKLLRLL
AQEAAGLPEWLFDESYEAVGDLAETIALLLPPPTEAHDIGLAVWIEERLLPLRKTPPDQL
ADTLRAQWRQLAPDERLVYFKLMTGAFRVGVSKLQVTQALAAVGAIDAKRVAQRLMGYTH
IAGQPSARDYATLIAPESDGEQNQQTSGQPYPFFLAHPFNEPVERFDALLGAPANWLIEW
KWDGIRAQLVKRAGQVWLWSRGEELVTDRFPELATMGEALPDGTVLDGEIVVWRKDETSP
GGEGKVQPFAELQRRIGRKTLGPKILRDIPVVLLAYDLLEWQGKDQRTLPQEERRVAMDE
LVAQLQHPQLIASPVLTGSDWNDLSRQREAARSMGVEGMMLKQRRAAYGVGRTKDVGTWW
KWKIDPLSIDAVLIYAQRGHGRRASLYSDYTFAVWDGPPGQEDRKLVPFAKAYSGLTDAE
MNRVDAVIRKTTIESFGPVRSVKPTLVFELGFEGIAKSTRHKSGIAVRFPRMLRWREDKP
VEEADTLETLGALLPG
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccttcgccgccctttatcgcgaactcgacgccaccacatcgagcctcgccaag
caggctgcgctgcagcgctatctgctggacgccgcgcaggaagacgcggcctgggccgtc
tactttctggccggcggcaagccgcggcaactggtgccgaccaagctgctgcggctgctc
gcacaggaggcggccggcctgcccgagtggctgttcgacgaaagctacgaggcggtcggc
gacctggccgaaaccatcgcgctgctgctgccgccaccgaccgaagcacacgacatcggt
ctggccgtgtggatcgaagagcgcctgctgccgctgcgaaagacaccgcccgaccagctc
gccgacacgctgcgcgcgcagtggcgccagctcgcaccggacgagcgcctggtctacttc
aagctcatgaccggcgccttccgcgtcggcgtgtcgaagctgcaggtgacgcaggcgctg
gccgccgtcggcgcgatcgacgccaagcgcgtggcgcagcgcctcatgggctacacgcac
atcgccggccagccctcggcgcgcgattacgccacgctcatcgcgcccgagagcgatggc
gaacagaaccagcagaccagtggccagccgtacccgttctttctcgcacatccgttcaac
gagccggtcgagcgcttcgatgcgctgctcggcgcgcccgcgaactggctgatcgagtgg
aagtgggatggcatccgggcccagctggtcaagcgcgcagggcaggtgtggctgtggtcg
cgcggcgaagaactggtgaccgatcgctttccggaacttgcgacgatgggcgaggcgctg
cccgacggcaccgtgctcgatggcgagatcgtcgtgtggcgcaaggatgagacatcgccc
ggcggtgaaggcaaggtgcagcccttcgctgaactgcagcgccgcatcggccgcaagacg
ctcggcccgaagatcctgcgcgacattccggtcgtgctgctcgcctacgacctgctcgaa
tggcagggcaaggaccagcgcacgctgccgcaggaagaacgccgcgtcgcgatggacgag
ctcgtggcgcagctgcagcatccgcaactcatcgcaagcccggtgctcaccggcagtgac
tggaacgacctctcccgccagcgcgaagccgcgcgctcgatgggcgtcgaagggatgatg
ttgaagcagcgccgcgccgcctacggcgtgggccgcaccaaggacgtcgggacctggtgg
aagtggaagatcgacccgctcagcatcgacgccgtgctcatctacgcgcagcgcggccac
ggccgccgtgccagcctctacagcgactacaccttcgcggtatgggacggcccgcccggc
caggaagaccgcaagctcgtgcccttcgccaaggcgtattcgggcctcaccgatgccgag
atgaaccgcgtcgacgccgtcatccgtaagaccacgatcgagagcttcggccccgtgcgc
agcgtgaagccgacgctggtcttcgagctcggtttcgaagggatcgcgaaaagcacgcgc
cacaagagcggcatcgcggtgcgcttcccgcgcatgctgcggtggcgggaggacaaaccg
gtggaggaggcggatacgctggagacgctgggggcgttgttgccgggatga
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