KEGG   Variovorax sp. PAMC 28711: AX767_15570
Entry
AX767_15570       CDS       T04325                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
vaa  Variovorax sp. PAMC 28711
Brite
KEGG Orthology (KO) [BR:vaa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vaa03019]
    AX767_15570
   03009 Ribosome biogenesis [BR:vaa03009]
    AX767_15570
Messenger RNA biogenesis [BR:vaa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AX767_15570
Ribosome biogenesis [BR:vaa03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    AX767_15570
SSDB
Motif
Pfam: RNase_T Ribosomal_L10 Rv2179c-like pP_pnuc_1
Other DBs
NCBI-ProteinID: AMM25618
UniProt: A0A126ZEQ1
LinkDB
Position
3215789..3216385
AA seq 198 aa
MPESNDPTSPAATVTLKKSDLNLVWLDCEMSGLDPEKERLLEIAVVVTGPDLSPRIEGPV
LVIHQSDEVLEAMDAWNKGTHGRSGLIDKVKASTLDEATAEKQLIEFISRYIPKTSSPMC
GNTIGQDRRFLVKYMPKLEGYFHYRNLDVSTLKELAKRWKPSAYSSFKKQQAHTALADVH
ESIEELAHYRTTFLRLVD
NT seq 597 nt   +upstreamnt  +downstreamnt
atgcctgaatccaatgatccgacctctcccgccgccactgtcacgctcaagaaaagcgat
ctgaaccttgtctggctcgactgcgaaatgagcgggctcgaccccgagaaagaacgcctg
ctcgagatcgccgtcgtggtcaccggaccggatctttcgccgcgtatcgaaggtccggtg
ctcgtcattcaccagagcgacgaggtgctggaagcaatggatgcctggaacaagggcacg
catggccgcagcgggctcatcgacaaggtgaaggcgtcgacgctggacgaagcgacggcg
gaaaagcaactgatcgaattcatctcgcgctacatcccgaagacgagctcgccgatgtgc
ggcaacacgattggtcaggatcgccgtttcctggtgaagtacatgccgaagctggaggga
tatttccactaccggaacctcgacgtgagcacgctcaaggaactcgccaagcgctggaag
ccgtcggcctacagcagcttcaagaagcagcaggcgcacacggcgctggccgatgtgcac
gagtcgatcgaagagctcgcccactaccgcacgacatttctgcgtcttgtcgattga

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