Variovorax sp. PAMC 28711: AX767_15570
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Entry
AX767_15570 CDS
T04325
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
vaa
Variovorax sp. PAMC 28711
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vaa03019
]
AX767_15570
03009 Ribosome biogenesis [BR:
vaa03009
]
AX767_15570
Messenger RNA biogenesis [BR:
vaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AX767_15570
Ribosome biogenesis [BR:
vaa03009
]
Eukaryotic type
Pre-60S particles
RNases
AX767_15570
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Ribosomal_L10
Rv2179c-like
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
AMM25618
UniProt:
A0A126ZEQ1
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Position
3215789..3216385
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AA seq
198 aa
AA seq
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MPESNDPTSPAATVTLKKSDLNLVWLDCEMSGLDPEKERLLEIAVVVTGPDLSPRIEGPV
LVIHQSDEVLEAMDAWNKGTHGRSGLIDKVKASTLDEATAEKQLIEFISRYIPKTSSPMC
GNTIGQDRRFLVKYMPKLEGYFHYRNLDVSTLKELAKRWKPSAYSSFKKQQAHTALADVH
ESIEELAHYRTTFLRLVD
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaatccaatgatccgacctctcccgccgccactgtcacgctcaagaaaagcgat
ctgaaccttgtctggctcgactgcgaaatgagcgggctcgaccccgagaaagaacgcctg
ctcgagatcgccgtcgtggtcaccggaccggatctttcgccgcgtatcgaaggtccggtg
ctcgtcattcaccagagcgacgaggtgctggaagcaatggatgcctggaacaagggcacg
catggccgcagcgggctcatcgacaaggtgaaggcgtcgacgctggacgaagcgacggcg
gaaaagcaactgatcgaattcatctcgcgctacatcccgaagacgagctcgccgatgtgc
ggcaacacgattggtcaggatcgccgtttcctggtgaagtacatgccgaagctggaggga
tatttccactaccggaacctcgacgtgagcacgctcaaggaactcgccaagcgctggaag
ccgtcggcctacagcagcttcaagaagcagcaggcgcacacggcgctggccgatgtgcac
gagtcgatcgaagagctcgcccactaccgcacgacatttctgcgtcttgtcgattga
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