Vibrio alfacsensis: D1115_04760
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Entry
D1115_04760 CDS
T05841
Symbol
recR
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
vaf
Vibrio alfacsensis
Pathway
vaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D1115_04760 (recR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vaf03400
]
D1115_04760 (recR)
DNA repair and recombination proteins [BR:
vaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D1115_04760 (recR)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
D1115_04760 (recR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_C
RecR_ZnF
HHH
HHH_5
DZR_2
Motif
Other DBs
NCBI-ProteinID:
AXY00643
UniProt:
A0A347UP64
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All DBs
Position
I:969419..970018
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AA seq
199 aa
AA seq
DB search
MRTSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADVLSQAMTEIGHCNEC
RTFTEEDVCHICANPKRQENGQICVVESPADIAAVEATGQYSGRYFALMGHLSPLDGIGP
SDIGLDVLDYRLRRGDVTEVILATNPTVEGEATAHYIAELCREHQVEASRIAHGVPVGGE
LELVDGTTLSHSLLGRHKI
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccagccatatgctggaacaattgatggaggccttacgttgtctacctggggtt
ggccccaagtcggcacagcgtatggcctttcatttgttacagcgtgatagaaaaggcggt
ctgcaacttgcagatgtgctgagccaagccatgacggaaatcggtcattgtaacgaatgc
cgaactttcactgaggaagacgtctgccatatttgtgccaacccaaaacgccaagaaaac
ggccagatttgtgtggtagaaagcccggcggacattgcggcagtagaagctactggacaa
tattctggtcgatactttgcgcttatggggcatttgtcgccgctagatggcatcggtcca
agtgatattgggcttgatgtattggattatcgtcttcgtcgtggtgatgttacggaagtg
attcttgccaccaacccaacggttgagggtgaagcaacggcacactatatcgctgaactg
tgcagagaacatcaagttgaggcgagtcgcatcgctcatggtgttcctgttggtggtgag
ttggagcttgttgatgggacaacgttgtctcattcattactgggtcgacataagatttaa
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