Vibrio alfacsensis: D1115_18360
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Entry
D1115_18360 CDS
T05841
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
vaf
Vibrio alfacsensis
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vaf03400
]
D1115_18360
DNA repair and recombination proteins [BR:
vaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D1115_18360
Archaeal homologous recombinant proteins
D1115_18360
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Band_3_cyto
Metallophos_3
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AXY02929
UniProt:
A0A347UVQ0
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All DBs
Position
II:722106..723245
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AA seq
379 aa
AA seq
DB search
MKFIHTSDWHLGRQFHNVSLLEDQQAVLEQLIQYIQNNPVDAVIVAGDIYDRSVPPTVAI
ELLNRVVKRICGELNTPMILISGNHDGAERLGFGSEQMKNAGLHIISNFEDMLNPVVIQT
KTAGLVAFYGMPYNDPEQVRFAYKEAVSTHDEAHKLLAGKITEQFQAGQRNVLVSHCFVD
GAIESESERPLSIGGSDRVSHEHFLNFDYVALGHLHQPQKKGEEYIRYSGSLMKYSFGEQ
NQKKGFTLVELDQNGFVSAEHIDLIAPHEMRIIEGELEQVIEQGKTDPKHEDYLLVRLMD
KHAILNPMEKLRAVYPNVLHLEKPGMLIGVEQEMAQAKLARSEIDMFRDFFIEAQDSHLS
QEQDQAISDIIKQLSQQSQ
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatccatacctctgattggcaccttggccgccaatttcataacgtctcattg
ctggaagatcagcaagcggttctagaacagttaattcaatatattcaaaataaccccgtt
gatgcagtcattgtggcgggtgacatctacgatcgctccgtgccgccgacagtggctatc
gaactgcttaaccgtgtagtaaagcgcatttgcggtgaattaaataccccaatgattttg
atttctggtaaccacgacggtgcagagcgtttggggtttggctctgaacagatgaaaaat
gcgggtctacacatcattagcaacttcgaagacatgcttaatcctgtcgttatccaaacc
aaaacagcagggcttgtagctttttatggcatgccttataacgatcctgagcaagttcgc
tttgcttacaaagaggcggtttcaacgcacgatgaagcgcacaaactattggccgggaaa
attaccgaacagttccaagcagggcagcgaaatgtattagtcagtcactgctttgttgat
ggcgcgattgaatccgaatctgagcgtccgctatcgatcggtggttctgatcgtgtcagc
cacgaacacttccttaacttcgattatgtggcactagggcatttgcatcagccgcagaaa
aaaggtgaagagtacattcgttattctggttcattgatgaaatatagctttggtgagcaa
aaccagaagaaaggtttcacgctggtggagctcgatcagaatgggtttgtttctgctgaa
catattgatctcattgcgcctcatgaaatgcgaatcatcgaaggcgagcttgagcaagtc
atcgagcaaggcaagacggatcctaagcacgaggattacttgctggtgcgtttaatggat
aagcacgcgattttaaatccaatggaaaagctacgtgcggtgtaccccaatgttttgcat
ctggaaaagccaggaatgctgattggcgtagagcaagagatggctcaagcgaaactggcg
agaagtgaaattgatatgttccgagacttctttattgaagcgcaagacagtcatttgtcg
caagagcaagatcaggcgatcagcgacatcatcaagcaactttcccagcaatctcagtaa
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