Vibrio alginolyticus: N646_1609
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Entry
N646_1609 CDS
T02840
Name
(GenBank) HTH-type transcriptional regulator luxR
KO
K10913
TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
Organism
vag
Vibrio alginolyticus
Pathway
vag02020
Two-component system
vag02024
Quorum sensing
vag05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vag00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
N646_1609
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
N646_1609
05111 Biofilm formation - Vibrio cholerae
N646_1609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vag03000
]
N646_1609
Transcription factors [BR:
vag03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
N646_1609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
DUF3755
TetR_C_11
Radial_spoke_3
HTH_7
LacI
Motif
Other DBs
NCBI-ProteinID:
AGV17442
UniProt:
A0A2I3C9B1
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Position
1:1724059..1724673
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AA seq
204 aa
AA seq
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MDSIAKRPRTRLSPIKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTR
EDLVDEVLNHVVRQFSNFLSDNIDLDLHARENIANITNAMIELVSQDCHWLKVWFEWSAS
TRDEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDQHDSEHLANLFHGICYSLFVQANRA
KGEAELKHLVNSYLDMLCIYNREH
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggactcaattgcaaagagacctagaactaggctttctccaattaagcgtaagcaacag
ttaatggaaatcgcattggaagtatttgcgcgccgcggcatcggtcgtggtggtcacgca
gatatcgcagaaattgctcaagtttctgtggcgactgtttttaactacttccctacacgc
gaagacttggtggatgaagttctcaatcacgtcgtacgtcagttctcaaacttcctatcg
gataacatagacctagacttacatgcacgtgaaaacatcgccaatattactaatgcgatg
atcgagcttgtcagccaagactgtcactggctaaaggtatggttcgagtggagtgcttca
acacgtgatgaagtatggccattgtttgtttcaactaaccgtactaaccagttgctggta
caaaacatgttcattaaagcaattgaacgcggtgaggtgtgtgaccagcacgattcagaa
cacttggcaaacctgttccacggtatttgttactcactgtttgtccaagcgaaccgcgct
aaaggtgaagcggaactgaaacatctagtgaattcatacttagatatgctttgcatttac
aaccgtgaacactaa
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