Variovorax sp. PMC12: C4F17_02230
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Entry
C4F17_02230 CDS
T05380
Name
(GenBank) LysR family transcriptional regulator
KO
K03576
LysR family transcriptional regulator, regulator for metE and metH
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vam03000
]
C4F17_02230
Transcription factors [BR:
vam03000
]
Prokaryotic type
Helix-turn-helix
LysR family
C4F17_02230
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_28
HTH_30
HTH_20
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AVQ79858
UniProt:
A0A2P1V3Y6
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All DBs
Position
1:498585..499502
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AA seq
305 aa
AA seq
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MLERAHLSIVQEVDKQGSLTAAAEVLHLTQSALSHSIRKLEAQLGTEIWQREGRSLRLTQ
AGQYLLAVANRVLPQLDLAEERLRQFAQGERGSLRIGMECHPCYQWLLKVASPYLASWPD
VDVDVKQKFQFGGIGALFGYEIDLLVTPDPLYKPGLHYEPVFDYEQVLVVPRGHALAGVP
YVKPEHLTQEVLVTYPVATDRLDIYNMFLMPAGVTPRRHKAIETTDIMLQMVASGRGVAA
LPRWLVQEYAEKMDIVPVRLGPRGIAKQIFLGAREADIEVDYLKAFVELARQSRELLEKG
KNSLT
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgctggaacgcgcccatctgtcgatcgtccaggaagtggacaagcaaggctcgctcacg
gccgccgccgaggtgctgcacctcacccaatcggccctgagccattcgatccgcaagctc
gaagcccagctcggcaccgagatctggcagcgcgaagggcgcagcctgcggctgacccag
gcggggcaatacctgctggcggtcgccaaccgggtgctgccgcaactggacctggccgag
gagcgcctgcgccagttcgcccagggcgagcgcggctcgctgcgcatcggcatggaatgc
catccgtgctaccagtggctgctgaaagtggcgtcgccgtacctggcgagctggcccgac
gtggatgtcgacgtgaagcagaaattccagttcggcggcatcggcgcgcttttcggctac
gagatcgacctgctggtcacgccagacccgctctacaagccgggcctgcactacgagccg
gtgttcgactacgagcaggtgctggtggtcccgcgcggccacgccctggcaggcgtgcct
tacgtgaagcccgagcacctgacgcaggaggtgctggtgacctaccccgtcgccaccgac
cggctggacatctacaacatgttcctcatgcccgccggcgtgacgcccaggcgccacaag
gccatagagaccaccgacatcatgttgcagatggtcgccagcggccggggcgtggcggcg
ctgccgcgctggctggtgcaggaatacgcggaaaagatggacatcgtgccggtgcggctc
gggcctcgcggcatcgccaagcagatcttcctgggcgcgcgcgaggccgacatcgaagtc
gactacctgaaggcattcgtcgagctggcgaggcaatcgcgcgaattgctcgaaaaaggg
aaaaactcgctgacttga
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