KEGG   Variovorax sp. PMC12: C4F17_03000
Entry
C4F17_03000       CDS       T05380                                 
Name
(GenBank) helicase
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
vam  Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:vam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vam03400]
    C4F17_03000
Enzymes [BR:vam01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     C4F17_03000
DNA repair and recombination proteins [BR:vam03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    C4F17_03000
SSDB
Motif
Pfam: Helicase_C_2 DEAD DEAD_2
Other DBs
NCBI-ProteinID: AVQ80002
UniProt: A0A2P1V492
LinkDB
Position
1:667476..669563
AA seq 695 aa
MTGALEDKVRDAFAQDGALSRAAEQFRERSGQTEMAMAVARTIDQGGVLVVEAGTGVGKT
FSYLVPALLSGERVLLSTATKTLQDQLFGRDLPRLVEAFGLPVRTALLKGRASYLCLHRL
DTARHDASLPERGSLRTLAKIEQWSKATRTGDLAELPGLDERSPLIPLITSTRENCLGAQ
CPQFKACHVNLARREALAADIVVINHHLFFADLAVRETGMAELLPSVSVVVFDEAHQLNE
TGVQFLGAQLGSGQALDFARDMLGSGLQHARGLVDWQQLVSGVERAARELRLVVGKQWPG
AKLRWLGPSPEGIDPDAWQHALDDLQHSFELAAEGLATVSEISPDFVRLHERARQLAKRT
ARFAQPCEVDSVRWVDVGSQLRLIESPLDIADAMRKRVLKIADASDAEEGGDADDGDELD
AYGERPARETPVHEDSGRAWVFTSATLGDEPTLRWFTEPCGLHDAEVLRVQSPFDYASQA
ALYVPRAFPKPNDPSHSQRVAELAARGATELGGRTLVLTTTLRALRTIGDAIKQQFELLE
TEARPEVLVQGELPKRVLMDRFREGASGGRAGCVLVASASFWEGFDAPGDALQLVVIDKL
PFPPPNDPLVEARSQRLEAQGRSSFADYSLPEAAVALKQGAGRLIRRETDSGVLAICDTR
LVAMGYGRRLLAALPPMRRLENEADFDAALDALRS
NT seq 2088 nt   +upstreamnt  +downstreamnt
gtgacaggcgcgctcgaagacaaggtgcgcgacgccttcgcgcaagacggtgcgctgtcg
cgggctgccgagcagttccgcgaacgctcgggccagaccgagatggccatggccgtggcc
cgcaccatcgatcagggcggcgtgctggtggtcgaggccggcaccggggtcggcaagact
ttctcgtacctcgtgccggcgctgctgagcggcgagcgcgtgctgctgtccaccgccacc
aagaccttgcaggaccaactgttcggccgcgacctgcctcggctggtcgaggccttcggg
ctgccggtgcgcacggcgttgttgaaggggcgcgccagctacctctgcctgcatcgcctg
gacaccgcgcgccatgacgcctcgctgcccgaacgcggcagcctgcgcacgctcgccaag
atcgagcaatggtccaaggccacgcgcaccggcgacctcgccgagctgccggggctggac
gagcgttcgccgctgatccccctcatcacctccacccgcgagaactgcctgggcgcgcag
tgcccgcagttcaaggcctgccacgtcaacctggcgcggcgcgaggcgctggccgccgac
atcgtggtcatcaaccatcacctgttcttcgcggacctcgcggtgcgcgagaccggcatg
gcggagttgctgcccagcgtgagcgtcgtcgtattcgacgaggcgcaccagctcaatgaa
accggcgtgcagttcctgggggcgcagctcggcagcggccaggcactcgatttcgcgcgt
gacatgctgggctcgggcctgcagcatgcgcgcgggctggtcgactggcagcaactggtt
tccggcgtcgagcgtgccgcgcgcgagctgcggctggtggtcggcaagcagtggccgggc
gccaagctgcgctggctgggcccttcgccggaaggcatcgaccccgacgcctggcagcat
gcgctcgatgacctgcagcactcgttcgaactggccgccgaagggctggccaccgtcagc
gaaatctcgcccgacttcgtgcggctgcacgagcgggcacgccagctcgccaagcgcacg
gcgcgcttcgcgcagccttgcgaggtcgactcggtgcgctgggtggatgtcggctcgcaa
ctgcggctgatcgagtcgccgctcgacatcgcggatgcgatgcgcaagcgggtgctcaag
atcgccgatgcgtcggatgccgaagaaggcggcgacgcggacgacggcgacgaactcgat
gcctacggcgagcggcccgcccgcgagacgccggtgcatgaagacagcggccgagcctgg
gtcttcacctcggccacgctcggcgacgagcccacgctgcgctggttcaccgagccctgc
ggcctgcacgatgccgaagtgctgcgcgtgcagagtccgttcgactatgcctcgcaggcg
gcgctgtacgtgcctcgcgcgttccccaagcccaacgacccctcgcacagtcagcgggtc
gccgaactggctgcgcgcggcgccaccgaactcggcggccgtacgctggtgctgacgacc
acgctgcgcgccttgcgcaccatcggcgacgccatcaagcagcagttcgagctgctggag
accgaagctcgccccgaggtgcttgtgcagggcgaactgcccaagcgggtgctgatggat
cgttttcgcgagggcgcgagcggcgggcgcgcgggctgcgtgctggtggcgtcggcttcg
ttctgggagggcttcgacgcgccgggcgacgcgctgcaactggtggtgatcgacaagctg
ccttttccgccgcccaacgaccctctggtcgaggcacgctcgcagcgcctggaggcgcag
gggcgcagttcgttcgcggattactcgttgcccgaagcggctgttgcgctcaagcagggg
gcggggcggttgatccggcgggagaccgacagcggcgtgctggcgatatgcgacacgcgc
ctggtcgccatgggctacggccgccgcctgctggcggcgcttccgccgatgcggcggctc
gaaaacgaagcggacttcgacgccgcgctggacgcgctcaggagctag

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